Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx54Q8K4L0 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx54Q8K4L0 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx54Q8K4L0 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Ddx54Q8K4L0 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ddx54Q8K4L0 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ddx54Q8K4L0 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ddx54Q8K4L0 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ddx54Q8K4L0 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ddx54Q8K4L0 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC15.59■□□□□ 0.09
Ddx54Q8K4L0 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ddx54Q8K4L0 Gm13204-201ENSMUST00000120110 821 ntBASIC15.59■□□□□ 0.09
Ddx54Q8K4L0 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Ddx54Q8K4L0 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Ddx54Q8K4L0 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ddx54Q8K4L0 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ddx54Q8K4L0 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC15.59■□□□□ 0.09
Ddx54Q8K4L0 Gm7904-201ENSMUST00000217049 465 ntBASIC15.59■□□□□ 0.09
Ddx54Q8K4L0 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC15.59■□□□□ 0.09
Ddx54Q8K4L0 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ddx54Q8K4L0 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ddx54Q8K4L0 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ddx54Q8K4L0 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Ddx54Q8K4L0 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ddx54Q8K4L0 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ddx54Q8K4L0 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ddx54Q8K4L0 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC15.59■□□□□ 0.09
Ddx54Q8K4L0 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ddx54Q8K4L0 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Ddx54Q8K4L0 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Ddx54Q8K4L0 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ddx54Q8K4L0 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ddx54Q8K4L0 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ddx54Q8K4L0 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ddx54Q8K4L0 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Ddx54Q8K4L0 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Ddx54Q8K4L0 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
Ddx54Q8K4L0 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ddx54Q8K4L0 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ddx54Q8K4L0 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ddx54Q8K4L0 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ddx54Q8K4L0 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ddx54Q8K4L0 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Ddx54Q8K4L0 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ddx54Q8K4L0 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ddx54Q8K4L0 Gm12194-201ENSMUST00000117756 1012 ntBASIC15.58■□□□□ 0.08
Ddx54Q8K4L0 Gm13422-201ENSMUST00000118834 504 ntBASIC15.58■□□□□ 0.08
Ddx54Q8K4L0 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Ddx54Q8K4L0 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Ddx54Q8K4L0 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ddx54Q8K4L0 Gm16030-201ENSMUST00000159098 603 ntBASIC15.58■□□□□ 0.08
Ddx54Q8K4L0 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC15.58■□□□□ 0.08
Ddx54Q8K4L0 Gm24954-201ENSMUST00000178831 110 ntBASIC15.58■□□□□ 0.08
Ddx54Q8K4L0 Gm37365-201ENSMUST00000193109 409 ntBASIC15.58■□□□□ 0.08
Ddx54Q8K4L0 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
Ddx54Q8K4L0 Gm26670-202ENSMUST00000226862 340 ntBASIC15.58■□□□□ 0.08
Ddx54Q8K4L0 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ddx54Q8K4L0 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ddx54Q8K4L0 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
Ddx54Q8K4L0 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ddx54Q8K4L0 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ddx54Q8K4L0 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Ddx54Q8K4L0 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC15.58■□□□□ 0.08
Ddx54Q8K4L0 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC15.58■□□□□ 0.08
Ddx54Q8K4L0 Gm45199-201ENSMUST00000207640 1507 ntBASIC15.58■□□□□ 0.08
Ddx54Q8K4L0 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ddx54Q8K4L0 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx54Q8K4L0 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Ddx54Q8K4L0 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx54Q8K4L0 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx54Q8K4L0 Gm9924-202ENSMUST00000192760 2311 ntBASIC15.57■□□□□ 0.08
Ddx54Q8K4L0 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx54Q8K4L0 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx54Q8K4L0 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Ddx54Q8K4L0 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx54Q8K4L0 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx54Q8K4L0 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx54Q8K4L0 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx54Q8K4L0 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx54Q8K4L0 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx54Q8K4L0 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Ddx54Q8K4L0 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx54Q8K4L0 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC15.57■□□□□ 0.08
Ddx54Q8K4L0 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx54Q8K4L0 Gm25226-201ENSMUST00000158198 123 ntBASIC15.57■□□□□ 0.08
Ddx54Q8K4L0 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC15.57■□□□□ 0.08
Ddx54Q8K4L0 Gm17931-201ENSMUST00000208132 634 ntBASIC15.57■□□□□ 0.08
Ddx54Q8K4L0 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx54Q8K4L0 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC15.57■□□□□ 0.08
Ddx54Q8K4L0 CT030170.2-201ENSMUST00000223267 126 ntBASIC15.57■□□□□ 0.08
Ddx54Q8K4L0 AC105408.1-201ENSMUST00000227771 802 ntBASIC15.57■□□□□ 0.08
Ddx54Q8K4L0 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx54Q8K4L0 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx54Q8K4L0 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx54Q8K4L0 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Ddx54Q8K4L0 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Ddx54Q8K4L0 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx54Q8K4L0 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx54Q8K4L0 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx54Q8K4L0 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms