Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Syne4Q8CII8 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Syne4Q8CII8 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Syne4Q8CII8 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Syne4Q8CII8 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.51□□□□□ -0.25
Syne4Q8CII8 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Syne4Q8CII8 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Syne4Q8CII8 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Syne4Q8CII8 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Syne4Q8CII8 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Syne4Q8CII8 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Syne4Q8CII8 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Syne4Q8CII8 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.51□□□□□ -0.25
Syne4Q8CII8 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Syne4Q8CII8 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Syne4Q8CII8 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Syne4Q8CII8 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Syne4Q8CII8 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Syne4Q8CII8 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Syne4Q8CII8 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Syne4Q8CII8 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Syne4Q8CII8 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Syne4Q8CII8 Gm11244-201ENSMUST00000121243 237 ntBASIC13.5□□□□□ -0.25
Syne4Q8CII8 Gm10169-201ENSMUST00000121822 348 ntBASIC13.5□□□□□ -0.25
Syne4Q8CII8 Gm5257-201ENSMUST00000121823 790 ntBASIC13.5□□□□□ -0.25
Syne4Q8CII8 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC13.5□□□□□ -0.25
Syne4Q8CII8 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC13.5□□□□□ -0.25
Syne4Q8CII8 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Syne4Q8CII8 Ighv2-1-201ENSMUST00000170946 353 ntBASIC13.5□□□□□ -0.25
Syne4Q8CII8 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.5□□□□□ -0.25
Syne4Q8CII8 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Syne4Q8CII8 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC13.5□□□□□ -0.25
Syne4Q8CII8 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC13.5□□□□□ -0.25
Syne4Q8CII8 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC13.5□□□□□ -0.25
Syne4Q8CII8 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.5□□□□□ -0.25
Syne4Q8CII8 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.5□□□□□ -0.25
Syne4Q8CII8 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Syne4Q8CII8 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.5□□□□□ -0.25
Syne4Q8CII8 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Syne4Q8CII8 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Syne4Q8CII8 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Syne4Q8CII8 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Syne4Q8CII8 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Syne4Q8CII8 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Syne4Q8CII8 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Syne4Q8CII8 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Syne4Q8CII8 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Syne4Q8CII8 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Syne4Q8CII8 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syne4Q8CII8 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.49□□□□□ -0.25
Syne4Q8CII8 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Syne4Q8CII8 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Syne4Q8CII8 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syne4Q8CII8 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syne4Q8CII8 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Syne4Q8CII8 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syne4Q8CII8 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syne4Q8CII8 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Syne4Q8CII8 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC13.49□□□□□ -0.25
Syne4Q8CII8 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Syne4Q8CII8 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC13.49□□□□□ -0.25
Syne4Q8CII8 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Syne4Q8CII8 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC13.49□□□□□ -0.25
Syne4Q8CII8 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Syne4Q8CII8 Gm28937-201ENSMUST00000185413 695 ntBASIC13.49□□□□□ -0.25
Syne4Q8CII8 Gm29400-201ENSMUST00000187208 695 ntBASIC13.49□□□□□ -0.25
Syne4Q8CII8 Gm28662-201ENSMUST00000188446 695 ntBASIC13.49□□□□□ -0.25
Syne4Q8CII8 Gm28251-201ENSMUST00000188835 695 ntBASIC13.49□□□□□ -0.25
Syne4Q8CII8 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Syne4Q8CII8 Gm37318-201ENSMUST00000194325 695 ntBASIC13.49□□□□□ -0.25
Syne4Q8CII8 Gm38017-201ENSMUST00000194768 695 ntBASIC13.49□□□□□ -0.25
Syne4Q8CII8 Gm37287-201ENSMUST00000195449 695 ntBASIC13.49□□□□□ -0.25
Syne4Q8CII8 Gm37793-201ENSMUST00000195548 695 ntBASIC13.49□□□□□ -0.25
Syne4Q8CII8 Gm3726-201ENSMUST00000203110 785 ntBASIC13.49□□□□□ -0.25
Syne4Q8CII8 CT009546.1-201ENSMUST00000222573 1120 ntBASIC13.49□□□□□ -0.25
Syne4Q8CII8 Lgi3-203ENSMUST00000226548 1001 ntBASIC13.49□□□□□ -0.25
Syne4Q8CII8 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Syne4Q8CII8 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Syne4Q8CII8 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syne4Q8CII8 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Syne4Q8CII8 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Syne4Q8CII8 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syne4Q8CII8 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syne4Q8CII8 Cog3-203ENSMUST00000227473 4197 ntBASIC13.49□□□□□ -0.25
Syne4Q8CII8 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.49□□□□□ -0.25
Syne4Q8CII8 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syne4Q8CII8 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syne4Q8CII8 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syne4Q8CII8 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syne4Q8CII8 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Syne4Q8CII8 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syne4Q8CII8 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.49□□□□□ -0.25
Syne4Q8CII8 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syne4Q8CII8 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syne4Q8CII8 Gm45199-201ENSMUST00000207640 1507 ntBASIC13.49□□□□□ -0.25
Syne4Q8CII8 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syne4Q8CII8 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syne4Q8CII8 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syne4Q8CII8 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syne4Q8CII8 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms