Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CopaQ8CIE6 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.27□□□□□ -0.45
CopaQ8CIE6 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.27□□□□□ -0.45
CopaQ8CIE6 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CopaQ8CIE6 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CopaQ8CIE6 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.27□□□□□ -0.45
CopaQ8CIE6 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CopaQ8CIE6 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CopaQ8CIE6 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CopaQ8CIE6 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.27□□□□□ -0.45
CopaQ8CIE6 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CopaQ8CIE6 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CopaQ8CIE6 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CopaQ8CIE6 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.27□□□□□ -0.45
CopaQ8CIE6 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
CopaQ8CIE6 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.27□□□□□ -0.45
CopaQ8CIE6 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.27□□□□□ -0.45
CopaQ8CIE6 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.27□□□□□ -0.45
CopaQ8CIE6 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
CopaQ8CIE6 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CopaQ8CIE6 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CopaQ8CIE6 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CopaQ8CIE6 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CopaQ8CIE6 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CopaQ8CIE6 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
CopaQ8CIE6 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
CopaQ8CIE6 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CopaQ8CIE6 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.26□□□□□ -0.45
CopaQ8CIE6 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CopaQ8CIE6 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CopaQ8CIE6 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CopaQ8CIE6 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CopaQ8CIE6 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CopaQ8CIE6 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CopaQ8CIE6 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
CopaQ8CIE6 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CopaQ8CIE6 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CopaQ8CIE6 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.26□□□□□ -0.45
CopaQ8CIE6 Gm5070-201ENSMUST00000177599 862 ntBASIC12.26□□□□□ -0.45
CopaQ8CIE6 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.26□□□□□ -0.45
CopaQ8CIE6 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CopaQ8CIE6 Gm43138-201ENSMUST00000199123 708 ntBASIC12.26□□□□□ -0.45
CopaQ8CIE6 Gm8913-201ENSMUST00000209491 641 ntBASIC12.26□□□□□ -0.45
CopaQ8CIE6 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.26□□□□□ -0.45
CopaQ8CIE6 Gm8385-201ENSMUST00000058999 643 ntBASIC12.26□□□□□ -0.45
CopaQ8CIE6 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CopaQ8CIE6 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CopaQ8CIE6 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CopaQ8CIE6 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CopaQ8CIE6 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
CopaQ8CIE6 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CopaQ8CIE6 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.26□□□□□ -0.45
CopaQ8CIE6 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CopaQ8CIE6 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CopaQ8CIE6 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.26□□□□□ -0.45
CopaQ8CIE6 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CopaQ8CIE6 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.26□□□□□ -0.45
CopaQ8CIE6 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CopaQ8CIE6 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CopaQ8CIE6 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.26□□□□□ -0.45
CopaQ8CIE6 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CopaQ8CIE6 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
CopaQ8CIE6 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
CopaQ8CIE6 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CopaQ8CIE6 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CopaQ8CIE6 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CopaQ8CIE6 AC107453.4-201ENSMUST00000227068 1817 ntBASIC12.25□□□□□ -0.45
CopaQ8CIE6 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CopaQ8CIE6 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CopaQ8CIE6 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.25□□□□□ -0.45
CopaQ8CIE6 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CopaQ8CIE6 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CopaQ8CIE6 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CopaQ8CIE6 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CopaQ8CIE6 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
CopaQ8CIE6 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
CopaQ8CIE6 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CopaQ8CIE6 Gm13296-201ENSMUST00000117854 997 ntBASIC12.25□□□□□ -0.45
CopaQ8CIE6 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.25□□□□□ -0.45
CopaQ8CIE6 Mir6927-201ENSMUST00000184494 71 ntBASIC12.25□□□□□ -0.45
CopaQ8CIE6 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CopaQ8CIE6 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.25□□□□□ -0.45
CopaQ8CIE6 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.25□□□□□ -0.45
CopaQ8CIE6 Gm19208-201ENSMUST00000213861 912 ntBASIC12.25□□□□□ -0.45
CopaQ8CIE6 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CopaQ8CIE6 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CopaQ8CIE6 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.25□□□□□ -0.45
CopaQ8CIE6 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CopaQ8CIE6 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CopaQ8CIE6 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
CopaQ8CIE6 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CopaQ8CIE6 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
CopaQ8CIE6 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CopaQ8CIE6 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CopaQ8CIE6 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CopaQ8CIE6 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CopaQ8CIE6 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CopaQ8CIE6 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CopaQ8CIE6 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.25□□□□□ -0.45
CopaQ8CIE6 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms