Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Brf1Q8CFK2 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC14.42□□□□□ -0.1
Brf1Q8CFK2 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Brf1Q8CFK2 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Brf1Q8CFK2 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC14.42□□□□□ -0.1
Brf1Q8CFK2 AC093022.1-201ENSMUST00000226949 1072 ntBASIC14.42□□□□□ -0.1
Brf1Q8CFK2 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC14.42□□□□□ -0.1
Brf1Q8CFK2 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Brf1Q8CFK2 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Brf1Q8CFK2 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Brf1Q8CFK2 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Brf1Q8CFK2 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Brf1Q8CFK2 Gm43172-201ENSMUST00000202139 2137 ntBASIC14.42□□□□□ -0.1
Brf1Q8CFK2 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Brf1Q8CFK2 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Brf1Q8CFK2 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Brf1Q8CFK2 Gm43807-201ENSMUST00000200678 1781 ntBASIC14.42□□□□□ -0.1
Brf1Q8CFK2 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC14.42□□□□□ -0.1
Brf1Q8CFK2 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Brf1Q8CFK2 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Brf1Q8CFK2 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Brf1Q8CFK2 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Brf1Q8CFK2 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brf1Q8CFK2 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Brf1Q8CFK2 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC14.41□□□□□ -0.1
Brf1Q8CFK2 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Brf1Q8CFK2 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Brf1Q8CFK2 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brf1Q8CFK2 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brf1Q8CFK2 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brf1Q8CFK2 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brf1Q8CFK2 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC14.41□□□□□ -0.1
Brf1Q8CFK2 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brf1Q8CFK2 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brf1Q8CFK2 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brf1Q8CFK2 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brf1Q8CFK2 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Brf1Q8CFK2 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brf1Q8CFK2 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Brf1Q8CFK2 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Brf1Q8CFK2 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC14.41□□□□□ -0.1
Brf1Q8CFK2 Gm15711-201ENSMUST00000118889 535 ntBASIC14.41□□□□□ -0.1
Brf1Q8CFK2 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC14.41□□□□□ -0.1
Brf1Q8CFK2 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brf1Q8CFK2 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Brf1Q8CFK2 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Brf1Q8CFK2 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brf1Q8CFK2 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Brf1Q8CFK2 Gm2383-201ENSMUST00000181461 807 ntBASIC14.41□□□□□ -0.1
Brf1Q8CFK2 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC14.41□□□□□ -0.1
Brf1Q8CFK2 Gm38319-201ENSMUST00000194537 1266 ntBASIC14.41□□□□□ -0.1
Brf1Q8CFK2 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC14.41□□□□□ -0.1
Brf1Q8CFK2 Gm9176-201ENSMUST00000219955 1120 ntBASIC14.41□□□□□ -0.1
Brf1Q8CFK2 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brf1Q8CFK2 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brf1Q8CFK2 Gm8385-201ENSMUST00000058999 643 ntBASIC14.41□□□□□ -0.1
Brf1Q8CFK2 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brf1Q8CFK2 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Brf1Q8CFK2 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brf1Q8CFK2 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Brf1Q8CFK2 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brf1Q8CFK2 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC14.41□□□□□ -0.1
Brf1Q8CFK2 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brf1Q8CFK2 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brf1Q8CFK2 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brf1Q8CFK2 AC122840.1-201ENSMUST00000220915 3334 ntBASIC14.41□□□□□ -0.1
Brf1Q8CFK2 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Brf1Q8CFK2 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brf1Q8CFK2 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brf1Q8CFK2 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brf1Q8CFK2 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brf1Q8CFK2 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Brf1Q8CFK2 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brf1Q8CFK2 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Brf1Q8CFK2 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Brf1Q8CFK2 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brf1Q8CFK2 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Brf1Q8CFK2 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brf1Q8CFK2 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.4□□□□□ -0.1
Brf1Q8CFK2 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brf1Q8CFK2 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brf1Q8CFK2 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Brf1Q8CFK2 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brf1Q8CFK2 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brf1Q8CFK2 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Brf1Q8CFK2 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Brf1Q8CFK2 Gm23949-201ENSMUST00000104027 127 ntBASIC14.4□□□□□ -0.1
Brf1Q8CFK2 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Brf1Q8CFK2 Gm11509-201ENSMUST00000117358 325 ntBASIC14.4□□□□□ -0.1
Brf1Q8CFK2 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC14.4□□□□□ -0.1
Brf1Q8CFK2 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC14.4□□□□□ -0.1
Brf1Q8CFK2 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Brf1Q8CFK2 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brf1Q8CFK2 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Brf1Q8CFK2 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Brf1Q8CFK2 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC14.4□□□□□ -0.1
Brf1Q8CFK2 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brf1Q8CFK2 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brf1Q8CFK2 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brf1Q8CFK2 Gm5705-201ENSMUST00000066241 711 ntBASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms