Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim52Q8CDV4 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim52Q8CDV4 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim52Q8CDV4 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim52Q8CDV4 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trim52Q8CDV4 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim52Q8CDV4 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim52Q8CDV4 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC14.7□□□□□ -0.06
Trim52Q8CDV4 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim52Q8CDV4 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trim52Q8CDV4 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim52Q8CDV4 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim52Q8CDV4 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim52Q8CDV4 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim52Q8CDV4 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim52Q8CDV4 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim52Q8CDV4 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim52Q8CDV4 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim52Q8CDV4 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim52Q8CDV4 AC138329.2-201ENSMUST00000225579 1842 ntBASIC14.69□□□□□ -0.06
Trim52Q8CDV4 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim52Q8CDV4 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim52Q8CDV4 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim52Q8CDV4 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim52Q8CDV4 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trim52Q8CDV4 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim52Q8CDV4 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim52Q8CDV4 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim52Q8CDV4 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trim52Q8CDV4 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim52Q8CDV4 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim52Q8CDV4 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim52Q8CDV4 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim52Q8CDV4 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC14.69□□□□□ -0.06
Trim52Q8CDV4 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim52Q8CDV4 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC14.69□□□□□ -0.06
Trim52Q8CDV4 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC14.69□□□□□ -0.06
Trim52Q8CDV4 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC14.69□□□□□ -0.06
Trim52Q8CDV4 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC14.69□□□□□ -0.06
Trim52Q8CDV4 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC14.69□□□□□ -0.06
Trim52Q8CDV4 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC14.69□□□□□ -0.06
Trim52Q8CDV4 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trim52Q8CDV4 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim52Q8CDV4 AC093022.4-203ENSMUST00000228523 2657 ntBASIC14.69□□□□□ -0.06
Trim52Q8CDV4 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim52Q8CDV4 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trim52Q8CDV4 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim52Q8CDV4 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim52Q8CDV4 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.69□□□□□ -0.06
Trim52Q8CDV4 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim52Q8CDV4 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.69□□□□□ -0.06
Trim52Q8CDV4 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim52Q8CDV4 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim52Q8CDV4 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim52Q8CDV4 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim52Q8CDV4 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trim52Q8CDV4 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trim52Q8CDV4 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim52Q8CDV4 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim52Q8CDV4 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim52Q8CDV4 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim52Q8CDV4 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trim52Q8CDV4 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Trim52Q8CDV4 AC108858.2-201ENSMUST00000228186 1425 ntBASIC14.68□□□□□ -0.06
Trim52Q8CDV4 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim52Q8CDV4 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim52Q8CDV4 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim52Q8CDV4 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim52Q8CDV4 Gm26013-201ENSMUST00000104404 119 ntBASIC14.68□□□□□ -0.06
Trim52Q8CDV4 Gm12795-201ENSMUST00000117594 539 ntBASIC14.68□□□□□ -0.06
Trim52Q8CDV4 Gm15615-201ENSMUST00000118876 198 ntBASIC14.68□□□□□ -0.06
Trim52Q8CDV4 Gm13937-201ENSMUST00000121000 988 ntBASIC14.68□□□□□ -0.06
Trim52Q8CDV4 Gm4879-201ENSMUST00000122190 1272 ntBASIC14.68□□□□□ -0.06
Trim52Q8CDV4 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC14.68□□□□□ -0.06
Trim52Q8CDV4 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC14.68□□□□□ -0.06
Trim52Q8CDV4 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC14.68□□□□□ -0.06
Trim52Q8CDV4 Gm42518-201ENSMUST00000196277 938 ntBASIC14.68□□□□□ -0.06
Trim52Q8CDV4 Gm7504-201ENSMUST00000201449 424 ntBASIC14.68□□□□□ -0.06
Trim52Q8CDV4 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim52Q8CDV4 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC14.68□□□□□ -0.06
Trim52Q8CDV4 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC14.68□□□□□ -0.06
Trim52Q8CDV4 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Trim52Q8CDV4 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim52Q8CDV4 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim52Q8CDV4 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim52Q8CDV4 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim52Q8CDV4 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim52Q8CDV4 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim52Q8CDV4 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC14.68□□□□□ -0.06
Trim52Q8CDV4 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.68□□□□□ -0.06
Trim52Q8CDV4 Gm45428-201ENSMUST00000209619 1789 ntBASIC14.68□□□□□ -0.06
Trim52Q8CDV4 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim52Q8CDV4 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC14.67□□□□□ -0.06
Trim52Q8CDV4 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim52Q8CDV4 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trim52Q8CDV4 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim52Q8CDV4 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC14.67□□□□□ -0.06
Trim52Q8CDV4 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim52Q8CDV4 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim52Q8CDV4 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms