Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Gm37246-201ENSMUST00000192665 835 ntBASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Gm42997-202ENSMUST00000200321 985 ntBASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Gm9555-201ENSMUST00000200908 583 ntBASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf31Q8CCF0 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf31Q8CCF0 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf31Q8CCF0 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Prpf31Q8CCF0 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf31Q8CCF0 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf31Q8CCF0 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf31Q8CCF0 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf31Q8CCF0 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Prpf31Q8CCF0 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Prpf31Q8CCF0 Mir680-2-201ENSMUST00000102163 110 ntBASIC13.09□□□□□ -0.31
Prpf31Q8CCF0 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Prpf31Q8CCF0 Gm23251-201ENSMUST00000103773 110 ntBASIC13.09□□□□□ -0.31
Prpf31Q8CCF0 Gm38228-201ENSMUST00000193169 1293 ntBASIC13.09□□□□□ -0.31
Prpf31Q8CCF0 Gm2965-201ENSMUST00000198365 343 ntBASIC13.09□□□□□ -0.31
Prpf31Q8CCF0 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf31Q8CCF0 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.09□□□□□ -0.31
Prpf31Q8CCF0 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf31Q8CCF0 AC151275.1-201ENSMUST00000224870 585 ntBASIC13.09□□□□□ -0.31
Prpf31Q8CCF0 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf31Q8CCF0 Gm10288-201ENSMUST00000084614 537 ntBASIC13.09□□□□□ -0.31
Prpf31Q8CCF0 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf31Q8CCF0 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf31Q8CCF0 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf31Q8CCF0 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf31Q8CCF0 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf31Q8CCF0 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf31Q8CCF0 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Prpf31Q8CCF0 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf31Q8CCF0 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Prpf31Q8CCF0 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf31Q8CCF0 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Prpf31Q8CCF0 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Prpf31Q8CCF0 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Prpf31Q8CCF0 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf31Q8CCF0 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf31Q8CCF0 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Prpf31Q8CCF0 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Prpf31Q8CCF0 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Prpf31Q8CCF0 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf31Q8CCF0 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf31Q8CCF0 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf31Q8CCF0 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf31Q8CCF0 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf31Q8CCF0 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf31Q8CCF0 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf31Q8CCF0 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf31Q8CCF0 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Prpf31Q8CCF0 Gm9796-201ENSMUST00000062249 2250 ntBASIC13.08□□□□□ -0.32
Prpf31Q8CCF0 Gm24891-201ENSMUST00000104391 136 ntBASIC13.08□□□□□ -0.32
Prpf31Q8CCF0 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf31Q8CCF0 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Prpf31Q8CCF0 Gm12165-201ENSMUST00000117047 342 ntBASIC13.08□□□□□ -0.32
Prpf31Q8CCF0 Gm11663-201ENSMUST00000117888 290 ntBASIC13.08□□□□□ -0.32
Prpf31Q8CCF0 Gm13611-201ENSMUST00000118269 318 ntBASIC13.08□□□□□ -0.32
Prpf31Q8CCF0 Gm11941-201ENSMUST00000119904 610 ntBASIC13.08□□□□□ -0.32
Prpf31Q8CCF0 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf31Q8CCF0 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC13.08□□□□□ -0.32
Prpf31Q8CCF0 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf31Q8CCF0 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Prpf31Q8CCF0 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC13.08□□□□□ -0.32
Prpf31Q8CCF0 Gm37986-201ENSMUST00000193285 383 ntBASIC13.08□□□□□ -0.32
Prpf31Q8CCF0 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC13.08□□□□□ -0.32
Prpf31Q8CCF0 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC13.08□□□□□ -0.32
Prpf31Q8CCF0 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf31Q8CCF0 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf31Q8CCF0 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf31Q8CCF0 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf31Q8CCF0 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf31Q8CCF0 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf31Q8CCF0 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf31Q8CCF0 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms