Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps53Q8CCB4 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vps53Q8CCB4 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps53Q8CCB4 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps53Q8CCB4 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps53Q8CCB4 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps53Q8CCB4 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.97□□□□□ -0.17
Vps53Q8CCB4 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps53Q8CCB4 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.96□□□□□ -0.17
Vps53Q8CCB4 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Vps53Q8CCB4 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps53Q8CCB4 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps53Q8CCB4 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps53Q8CCB4 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps53Q8CCB4 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps53Q8CCB4 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps53Q8CCB4 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC13.96□□□□□ -0.17
Vps53Q8CCB4 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Vps53Q8CCB4 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps53Q8CCB4 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC13.96□□□□□ -0.17
Vps53Q8CCB4 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC13.96□□□□□ -0.17
Vps53Q8CCB4 Gm17040-202ENSMUST00000170597 889 ntBASIC13.96□□□□□ -0.17
Vps53Q8CCB4 Gm10109-202ENSMUST00000206890 1211 ntBASIC13.96□□□□□ -0.17
Vps53Q8CCB4 Gm45224-201ENSMUST00000208203 414 ntBASIC13.96□□□□□ -0.17
Vps53Q8CCB4 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.96□□□□□ -0.17
Vps53Q8CCB4 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.96□□□□□ -0.17
Vps53Q8CCB4 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.96□□□□□ -0.17
Vps53Q8CCB4 Gm9826-201ENSMUST00000029124 1299 ntBASIC13.96□□□□□ -0.17
Vps53Q8CCB4 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps53Q8CCB4 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vps53Q8CCB4 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps53Q8CCB4 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps53Q8CCB4 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vps53Q8CCB4 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
Vps53Q8CCB4 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vps53Q8CCB4 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.96□□□□□ -0.18
Vps53Q8CCB4 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vps53Q8CCB4 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.96□□□□□ -0.18
Vps53Q8CCB4 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vps53Q8CCB4 Gm45011-201ENSMUST00000207620 2297 ntBASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Gm24749-201ENSMUST00000157838 343 ntBASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Mir1943-201ENSMUST00000158276 73 ntBASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Gm5070-201ENSMUST00000177599 862 ntBASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Gm27552-201ENSMUST00000183351 62 ntBASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Gm27844-201ENSMUST00000183613 62 ntBASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.95□□□□□ -0.18
Vps53Q8CCB4 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Gm18730-201ENSMUST00000218038 343 ntBASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Gm18556-201ENSMUST00000219748 1031 ntBASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Gm14267-206ENSMUST00000226870 1209 ntBASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Pck2-205ENSMUST00000226352 2784 ntBASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps53Q8CCB4 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Vps53Q8CCB4 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms