Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 AC241621.2-201ENSMUST00000223991 2151 ntBASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 Gm5385-201ENSMUST00000118988 1559 ntBASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col6a6Q8C6K9 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC10.79□□□□□ -0.68
Col6a6Q8C6K9 Gm22442-201ENSMUST00000157256 144 ntBASIC10.79□□□□□ -0.68
Col6a6Q8C6K9 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC10.79□□□□□ -0.68
Col6a6Q8C6K9 Gm18711-201ENSMUST00000199341 750 ntBASIC10.79□□□□□ -0.68
Col6a6Q8C6K9 Gm8574-201ENSMUST00000203207 924 ntBASIC10.79□□□□□ -0.68
Col6a6Q8C6K9 Gm44506-201ENSMUST00000206278 965 ntBASIC10.79□□□□□ -0.68
Col6a6Q8C6K9 Gm30671-201ENSMUST00000214898 318 ntBASIC10.79□□□□□ -0.68
Col6a6Q8C6K9 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC10.79□□□□□ -0.68
Col6a6Q8C6K9 Gm16380-201ENSMUST00000077997 478 ntBASIC10.79□□□□□ -0.68
Col6a6Q8C6K9 Gm44851-201ENSMUST00000205735 2309 ntBASIC10.79□□□□□ -0.68
Col6a6Q8C6K9 Gm18198-201ENSMUST00000204986 1551 ntBASIC10.79□□□□□ -0.68
Col6a6Q8C6K9 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col6a6Q8C6K9 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col6a6Q8C6K9 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Col6a6Q8C6K9 Gm45266-201ENSMUST00000210111 2173 ntBASIC10.79□□□□□ -0.68
Col6a6Q8C6K9 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.79□□□□□ -0.68
Col6a6Q8C6K9 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col6a6Q8C6K9 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Col6a6Q8C6K9 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.79□□□□□ -0.68
Col6a6Q8C6K9 Gm37691-201ENSMUST00000192147 2573 ntBASIC10.79□□□□□ -0.68
Col6a6Q8C6K9 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col6a6Q8C6K9 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Col6a6Q8C6K9 Gm11949-201ENSMUST00000117640 372 ntBASIC10.79□□□□□ -0.68
Col6a6Q8C6K9 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Col6a6Q8C6K9 Gm13549-201ENSMUST00000118339 796 ntBASIC10.79□□□□□ -0.68
Col6a6Q8C6K9 Gm14213-201ENSMUST00000119778 768 ntBASIC10.79□□□□□ -0.68
Col6a6Q8C6K9 Gm7150-201ENSMUST00000122032 981 ntBASIC10.79□□□□□ -0.68
Col6a6Q8C6K9 Gm18367-201ENSMUST00000176139 600 ntBASIC10.79□□□□□ -0.68
Col6a6Q8C6K9 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col6a6Q8C6K9 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC10.79□□□□□ -0.68
Col6a6Q8C6K9 Gm6108-201ENSMUST00000208365 367 ntBASIC10.79□□□□□ -0.68
Col6a6Q8C6K9 Gm19640-201ENSMUST00000214849 464 ntBASIC10.79□□□□□ -0.68
Col6a6Q8C6K9 Gm8894-201ENSMUST00000074642 666 ntBASIC10.79□□□□□ -0.68
Col6a6Q8C6K9 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col6a6Q8C6K9 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Col6a6Q8C6K9 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col6a6Q8C6K9 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.79□□□□□ -0.68
Col6a6Q8C6K9 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Col6a6Q8C6K9 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col6a6Q8C6K9 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col6a6Q8C6K9 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col6a6Q8C6K9 AC166836.1-201ENSMUST00000219933 1795 ntBASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Gm18201-201ENSMUST00000174735 875 ntBASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Gm26134-201ENSMUST00000178484 110 ntBASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 n-R5s185-201ENSMUST00000083953 119 ntBASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 243.6 ms