Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Gm29127-201ENSMUST00000188304 517 ntBASIC10.04□□□□□ -0.8
Tsen54Q8C2A2 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC10.04□□□□□ -0.8
Tsen54Q8C2A2 Gm29705-201ENSMUST00000212598 474 ntBASIC10.04□□□□□ -0.8
Tsen54Q8C2A2 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC10.04□□□□□ -0.8
Tsen54Q8C2A2 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tsen54Q8C2A2 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tsen54Q8C2A2 Gm25857-201ENSMUST00000082788 129 ntBASIC10.04□□□□□ -0.8
Tsen54Q8C2A2 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tsen54Q8C2A2 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tsen54Q8C2A2 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Tsen54Q8C2A2 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tsen54Q8C2A2 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.04□□□□□ -0.8
Tsen54Q8C2A2 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.04□□□□□ -0.8
Tsen54Q8C2A2 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tsen54Q8C2A2 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Tsen54Q8C2A2 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tsen54Q8C2A2 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.04□□□□□ -0.8
Tsen54Q8C2A2 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Tsen54Q8C2A2 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Tsen54Q8C2A2 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tsen54Q8C2A2 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tsen54Q8C2A2 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.04□□□□□ -0.8
Tsen54Q8C2A2 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tsen54Q8C2A2 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tsen54Q8C2A2 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Tsen54Q8C2A2 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 AC126262.1-201ENSMUST00000221802 1904 ntBASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 Gm38049-201ENSMUST00000195698 1372 ntBASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 Gm37497-201ENSMUST00000195830 798 ntBASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 Gm43818-201ENSMUST00000200605 466 ntBASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 Gm18062-201ENSMUST00000208020 547 ntBASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 Gm18055-201ENSMUST00000208254 547 ntBASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Tsen54Q8C2A2 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
Tsen54Q8C2A2 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Tsen54Q8C2A2 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Tsen54Q8C2A2 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Tsen54Q8C2A2 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Tsen54Q8C2A2 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Tsen54Q8C2A2 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Tsen54Q8C2A2 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Tsen54Q8C2A2 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Tsen54Q8C2A2 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Tsen54Q8C2A2 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Tsen54Q8C2A2 Gm21136-201ENSMUST00000186812 2575 ntBASIC10.02□□□□□ -0.81
Tsen54Q8C2A2 Gm6605-201ENSMUST00000031488 2574 ntBASIC10.02□□□□□ -0.81
Tsen54Q8C2A2 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Tsen54Q8C2A2 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Tsen54Q8C2A2 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.81
Tsen54Q8C2A2 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Tsen54Q8C2A2 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Tsen54Q8C2A2 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Tsen54Q8C2A2 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.02□□□□□ -0.81
Tsen54Q8C2A2 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Tsen54Q8C2A2 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC10.02□□□□□ -0.81
Tsen54Q8C2A2 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Tsen54Q8C2A2 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Tsen54Q8C2A2 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC10.02□□□□□ -0.81
Tsen54Q8C2A2 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC10.02□□□□□ -0.81
Tsen54Q8C2A2 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC10.02□□□□□ -0.81
Tsen54Q8C2A2 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms