Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trerf1Q8BXJ2 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trerf1Q8BXJ2 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trerf1Q8BXJ2 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trerf1Q8BXJ2 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Trerf1Q8BXJ2 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trerf1Q8BXJ2 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.73□□□□□ -0.37
Trerf1Q8BXJ2 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trerf1Q8BXJ2 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trerf1Q8BXJ2 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trerf1Q8BXJ2 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.73□□□□□ -0.37
Trerf1Q8BXJ2 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trerf1Q8BXJ2 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trerf1Q8BXJ2 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trerf1Q8BXJ2 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 Gm24255-201ENSMUST00000104481 128 ntBASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 Gm37201-201ENSMUST00000191845 523 ntBASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 Gm37259-201ENSMUST00000193903 849 ntBASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 Gm39404-201ENSMUST00000216350 313 ntBASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trerf1Q8BXJ2 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.71□□□□□ -0.37
Trerf1Q8BXJ2 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trerf1Q8BXJ2 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.71□□□□□ -0.37
Trerf1Q8BXJ2 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trerf1Q8BXJ2 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trerf1Q8BXJ2 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trerf1Q8BXJ2 Glt1d1-201ENSMUST00000118139 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trerf1Q8BXJ2 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trerf1Q8BXJ2 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trerf1Q8BXJ2 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trerf1Q8BXJ2 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trerf1Q8BXJ2 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trerf1Q8BXJ2 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trerf1Q8BXJ2 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trerf1Q8BXJ2 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trerf1Q8BXJ2 Gm22323-201ENSMUST00000103832 109 ntBASIC12.71□□□□□ -0.37
Trerf1Q8BXJ2 Gm11531-201ENSMUST00000117614 555 ntBASIC12.71□□□□□ -0.37
Trerf1Q8BXJ2 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.71□□□□□ -0.37
Trerf1Q8BXJ2 Gm14381-201ENSMUST00000122105 414 ntBASIC12.71□□□□□ -0.37
Trerf1Q8BXJ2 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Trerf1Q8BXJ2 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.71□□□□□ -0.37
Trerf1Q8BXJ2 Gm5950-201ENSMUST00000213337 772 ntBASIC12.71□□□□□ -0.37
Trerf1Q8BXJ2 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.71□□□□□ -0.37
Trerf1Q8BXJ2 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trerf1Q8BXJ2 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trerf1Q8BXJ2 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trerf1Q8BXJ2 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trerf1Q8BXJ2 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trerf1Q8BXJ2 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trerf1Q8BXJ2 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.71□□□□□ -0.37
Trerf1Q8BXJ2 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trerf1Q8BXJ2 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Trerf1Q8BXJ2 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC12.71□□□□□ -0.38
Trerf1Q8BXJ2 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC12.71□□□□□ -0.38
Trerf1Q8BXJ2 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trerf1Q8BXJ2 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trerf1Q8BXJ2 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trerf1Q8BXJ2 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trerf1Q8BXJ2 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trerf1Q8BXJ2 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trerf1Q8BXJ2 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms