Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim65Q8BFW4 Gm22042-201ENSMUST00000082989 165 ntBASIC12.82□□□□□ -0.36
Trim65Q8BFW4 Gm26110-201ENSMUST00000083971 165 ntBASIC12.82□□□□□ -0.36
Trim65Q8BFW4 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim65Q8BFW4 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim65Q8BFW4 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim65Q8BFW4 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim65Q8BFW4 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim65Q8BFW4 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim65Q8BFW4 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim65Q8BFW4 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.82□□□□□ -0.36
Trim65Q8BFW4 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim65Q8BFW4 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim65Q8BFW4 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Trim65Q8BFW4 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim65Q8BFW4 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim65Q8BFW4 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim65Q8BFW4 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim65Q8BFW4 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim65Q8BFW4 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.81□□□□□ -0.36
Trim65Q8BFW4 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim65Q8BFW4 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim65Q8BFW4 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trim65Q8BFW4 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim65Q8BFW4 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim65Q8BFW4 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim65Q8BFW4 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim65Q8BFW4 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim65Q8BFW4 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim65Q8BFW4 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim65Q8BFW4 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim65Q8BFW4 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim65Q8BFW4 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Trim65Q8BFW4 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trim65Q8BFW4 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim65Q8BFW4 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim65Q8BFW4 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim65Q8BFW4 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.81□□□□□ -0.36
Trim65Q8BFW4 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.81□□□□□ -0.36
Trim65Q8BFW4 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trim65Q8BFW4 Gm43962-201ENSMUST00000203898 190 ntBASIC12.81□□□□□ -0.36
Trim65Q8BFW4 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.81□□□□□ -0.36
Trim65Q8BFW4 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.81□□□□□ -0.36
Trim65Q8BFW4 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim65Q8BFW4 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim65Q8BFW4 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim65Q8BFW4 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Trim65Q8BFW4 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim65Q8BFW4 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim65Q8BFW4 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trim65Q8BFW4 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim65Q8BFW4 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim65Q8BFW4 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim65Q8BFW4 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim65Q8BFW4 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.81□□□□□ -0.36
Trim65Q8BFW4 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim65Q8BFW4 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim65Q8BFW4 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim65Q8BFW4 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim65Q8BFW4 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim65Q8BFW4 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim65Q8BFW4 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim65Q8BFW4 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trim65Q8BFW4 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim65Q8BFW4 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.8□□□□□ -0.36
Trim65Q8BFW4 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim65Q8BFW4 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim65Q8BFW4 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim65Q8BFW4 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim65Q8BFW4 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim65Q8BFW4 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim65Q8BFW4 Gm11511-201ENSMUST00000118146 540 ntBASIC12.8□□□□□ -0.36
Trim65Q8BFW4 Gm13665-201ENSMUST00000120830 528 ntBASIC12.8□□□□□ -0.36
Trim65Q8BFW4 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Trim65Q8BFW4 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim65Q8BFW4 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.8□□□□□ -0.36
Trim65Q8BFW4 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Trim65Q8BFW4 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.8□□□□□ -0.36
Trim65Q8BFW4 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.8□□□□□ -0.36
Trim65Q8BFW4 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.8□□□□□ -0.36
Trim65Q8BFW4 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trim65Q8BFW4 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.8□□□□□ -0.36
Trim65Q8BFW4 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim65Q8BFW4 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim65Q8BFW4 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trim65Q8BFW4 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trim65Q8BFW4 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim65Q8BFW4 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim65Q8BFW4 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim65Q8BFW4 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trim65Q8BFW4 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim65Q8BFW4 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim65Q8BFW4 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.8□□□□□ -0.36
Trim65Q8BFW4 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim65Q8BFW4 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim65Q8BFW4 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim65Q8BFW4 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim65Q8BFW4 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim65Q8BFW4 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim65Q8BFW4 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms