Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh8Q7TSK3 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh8Q7TSK3 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.84□□□□□ -0.51
Pcdh8Q7TSK3 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh8Q7TSK3 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh8Q7TSK3 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh8Q7TSK3 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh8Q7TSK3 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh8Q7TSK3 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Pcdh8Q7TSK3 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Pcdh8Q7TSK3 Gm23596-201ENSMUST00000104304 132 ntBASIC11.84□□□□□ -0.51
Pcdh8Q7TSK3 Gm13035-201ENSMUST00000117496 342 ntBASIC11.84□□□□□ -0.51
Pcdh8Q7TSK3 Gm12616-201ENSMUST00000118594 382 ntBASIC11.84□□□□□ -0.51
Pcdh8Q7TSK3 n-R5s14-201ENSMUST00000122688 107 ntBASIC11.84□□□□□ -0.51
Pcdh8Q7TSK3 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.84□□□□□ -0.51
Pcdh8Q7TSK3 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.84□□□□□ -0.51
Pcdh8Q7TSK3 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.84□□□□□ -0.51
Pcdh8Q7TSK3 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh8Q7TSK3 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.84□□□□□ -0.51
Pcdh8Q7TSK3 Mir1943-201ENSMUST00000158276 73 ntBASIC11.84□□□□□ -0.51
Pcdh8Q7TSK3 Gm12624-201ENSMUST00000177615 382 ntBASIC11.84□□□□□ -0.51
Pcdh8Q7TSK3 Gm12621-201ENSMUST00000177760 382 ntBASIC11.84□□□□□ -0.51
Pcdh8Q7TSK3 Gm12615-201ENSMUST00000177970 382 ntBASIC11.84□□□□□ -0.51
Pcdh8Q7TSK3 Gm12622-201ENSMUST00000177975 382 ntBASIC11.84□□□□□ -0.51
Pcdh8Q7TSK3 Gm12627-201ENSMUST00000178412 382 ntBASIC11.84□□□□□ -0.51
Pcdh8Q7TSK3 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh8Q7TSK3 Gm12625-201ENSMUST00000179122 382 ntBASIC11.84□□□□□ -0.51
Pcdh8Q7TSK3 Gm12614-201ENSMUST00000179586 382 ntBASIC11.84□□□□□ -0.51
Pcdh8Q7TSK3 Gm12613-201ENSMUST00000180323 382 ntBASIC11.84□□□□□ -0.51
Pcdh8Q7TSK3 Gm5523-201ENSMUST00000180415 997 ntBASIC11.84□□□□□ -0.51
Pcdh8Q7TSK3 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.84□□□□□ -0.51
Pcdh8Q7TSK3 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh8Q7TSK3 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh8Q7TSK3 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh8Q7TSK3 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh8Q7TSK3 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh8Q7TSK3 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Pcdh8Q7TSK3 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh8Q7TSK3 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh8Q7TSK3 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh8Q7TSK3 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh8Q7TSK3 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh8Q7TSK3 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Pcdh8Q7TSK3 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.83□□□□□ -0.51
Pcdh8Q7TSK3 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 Gm12196-201ENSMUST00000120954 262 ntBASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 Gm15432-201ENSMUST00000121106 195 ntBASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 Gm4157-201ENSMUST00000211647 679 ntBASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 Gm5369-201ENSMUST00000217499 588 ntBASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh8Q7TSK3 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms