Protein–RNA interactions for Protein: Q6PIJ4

Nfrkb, Nuclear factor related to kappa-B-binding protein, mousemouse

Known RBP Predictions only

Length 1,296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfrkbQ6PIJ4 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NfrkbQ6PIJ4 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
NfrkbQ6PIJ4 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NfrkbQ6PIJ4 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
NfrkbQ6PIJ4 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
NfrkbQ6PIJ4 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NfrkbQ6PIJ4 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NfrkbQ6PIJ4 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NfrkbQ6PIJ4 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NfrkbQ6PIJ4 Gm11663-201ENSMUST00000117888 290 ntBASIC13.52□□□□□ -0.25
NfrkbQ6PIJ4 Gm15573-201ENSMUST00000119487 540 ntBASIC13.52□□□□□ -0.25
NfrkbQ6PIJ4 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NfrkbQ6PIJ4 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NfrkbQ6PIJ4 Gm28686-201ENSMUST00000187404 609 ntBASIC13.52□□□□□ -0.25
NfrkbQ6PIJ4 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.52□□□□□ -0.25
NfrkbQ6PIJ4 CT485607.1-201ENSMUST00000216100 85 ntBASIC13.52□□□□□ -0.25
NfrkbQ6PIJ4 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.52□□□□□ -0.25
NfrkbQ6PIJ4 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NfrkbQ6PIJ4 Gm9785-201ENSMUST00000062642 1006 ntBASIC13.52□□□□□ -0.25
NfrkbQ6PIJ4 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NfrkbQ6PIJ4 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.52□□□□□ -0.25
NfrkbQ6PIJ4 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC13.52□□□□□ -0.25
NfrkbQ6PIJ4 Gm14150-201ENSMUST00000122404 1354 ntBASIC13.52□□□□□ -0.25
NfrkbQ6PIJ4 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
NfrkbQ6PIJ4 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
NfrkbQ6PIJ4 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
NfrkbQ6PIJ4 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.52□□□□□ -0.25
NfrkbQ6PIJ4 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NfrkbQ6PIJ4 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC13.52□□□□□ -0.25
NfrkbQ6PIJ4 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NfrkbQ6PIJ4 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NfrkbQ6PIJ4 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NfrkbQ6PIJ4 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
NfrkbQ6PIJ4 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
NfrkbQ6PIJ4 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NfrkbQ6PIJ4 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
NfrkbQ6PIJ4 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NfrkbQ6PIJ4 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
NfrkbQ6PIJ4 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NfrkbQ6PIJ4 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
NfrkbQ6PIJ4 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NfrkbQ6PIJ4 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NfrkbQ6PIJ4 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NfrkbQ6PIJ4 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
NfrkbQ6PIJ4 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NfrkbQ6PIJ4 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
NfrkbQ6PIJ4 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NfrkbQ6PIJ4 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NfrkbQ6PIJ4 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.51□□□□□ -0.25
NfrkbQ6PIJ4 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NfrkbQ6PIJ4 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NfrkbQ6PIJ4 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NfrkbQ6PIJ4 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
NfrkbQ6PIJ4 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.51□□□□□ -0.25
NfrkbQ6PIJ4 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
NfrkbQ6PIJ4 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NfrkbQ6PIJ4 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
NfrkbQ6PIJ4 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NfrkbQ6PIJ4 Gm12164-201ENSMUST00000121695 551 ntBASIC13.51□□□□□ -0.25
NfrkbQ6PIJ4 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC13.51□□□□□ -0.25
NfrkbQ6PIJ4 Gm5778-201ENSMUST00000171003 1072 ntBASIC13.51□□□□□ -0.25
NfrkbQ6PIJ4 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NfrkbQ6PIJ4 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC13.51□□□□□ -0.25
NfrkbQ6PIJ4 Gm9463-201ENSMUST00000206707 601 ntBASIC13.51□□□□□ -0.25
NfrkbQ6PIJ4 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC13.51□□□□□ -0.25
NfrkbQ6PIJ4 Gm9797-202ENSMUST00000218003 294 ntBASIC13.51□□□□□ -0.25
NfrkbQ6PIJ4 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NfrkbQ6PIJ4 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NfrkbQ6PIJ4 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.51□□□□□ -0.25
NfrkbQ6PIJ4 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
NfrkbQ6PIJ4 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NfrkbQ6PIJ4 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NfrkbQ6PIJ4 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NfrkbQ6PIJ4 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NfrkbQ6PIJ4 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
NfrkbQ6PIJ4 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NfrkbQ6PIJ4 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NfrkbQ6PIJ4 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NfrkbQ6PIJ4 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NfrkbQ6PIJ4 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NfrkbQ6PIJ4 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NfrkbQ6PIJ4 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NfrkbQ6PIJ4 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NfrkbQ6PIJ4 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
NfrkbQ6PIJ4 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NfrkbQ6PIJ4 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC13.5□□□□□ -0.25
NfrkbQ6PIJ4 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
NfrkbQ6PIJ4 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
NfrkbQ6PIJ4 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NfrkbQ6PIJ4 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NfrkbQ6PIJ4 Gm9387-201ENSMUST00000098624 1320 ntBASIC13.5□□□□□ -0.25
NfrkbQ6PIJ4 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.5□□□□□ -0.25
NfrkbQ6PIJ4 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
NfrkbQ6PIJ4 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
NfrkbQ6PIJ4 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
NfrkbQ6PIJ4 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC13.5□□□□□ -0.25
NfrkbQ6PIJ4 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC13.5□□□□□ -0.25
NfrkbQ6PIJ4 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC13.5□□□□□ -0.25
NfrkbQ6PIJ4 Gm22144-201ENSMUST00000157402 102 ntBASIC13.5□□□□□ -0.25
NfrkbQ6PIJ4 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms