Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf220Q6PDX6 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Rnf220Q6PDX6 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf220Q6PDX6 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Rnf220Q6PDX6 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf220Q6PDX6 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Rnf220Q6PDX6 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf220Q6PDX6 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf220Q6PDX6 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Rnf220Q6PDX6 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 Gm11618-201ENSMUST00000117946 267 ntBASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 Gm27701-201ENSMUST00000184498 110 ntBASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 Gm44369-201ENSMUST00000204543 2175 ntBASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf220Q6PDX6 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Gm14921-201ENSMUST00000118643 908 ntBASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Gm13612-201ENSMUST00000119276 390 ntBASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf220Q6PDX6 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 94.3 ms