Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Gm43969-201ENSMUST00000204833 535 ntBASIC18.11■□□□□ 0.49
Slx4Q6P1D7 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC18.11■□□□□ 0.49
Slx4Q6P1D7 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slx4Q6P1D7 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slx4Q6P1D7 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slx4Q6P1D7 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slx4Q6P1D7 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slx4Q6P1D7 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slx4Q6P1D7 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slx4Q6P1D7 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slx4Q6P1D7 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Slx4Q6P1D7 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Slx4Q6P1D7 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Slx4Q6P1D7 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC18.1■□□□□ 0.49
Slx4Q6P1D7 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slx4Q6P1D7 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Slx4Q6P1D7 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slx4Q6P1D7 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slx4Q6P1D7 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC18.1■□□□□ 0.49
Slx4Q6P1D7 Gm11996-201ENSMUST00000117538 915 ntBASIC18.1■□□□□ 0.49
Slx4Q6P1D7 Gm23675-201ENSMUST00000157311 125 ntBASIC18.1■□□□□ 0.49
Slx4Q6P1D7 Gm25830-201ENSMUST00000158923 132 ntBASIC18.1■□□□□ 0.49
Slx4Q6P1D7 Gm9162-201ENSMUST00000182081 991 ntBASIC18.1■□□□□ 0.49
Slx4Q6P1D7 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC18.1■□□□□ 0.49
Slx4Q6P1D7 Gm9369-201ENSMUST00000196009 733 ntBASIC18.1■□□□□ 0.49
Slx4Q6P1D7 Gm5599-201ENSMUST00000209602 788 ntBASIC18.1■□□□□ 0.49
Slx4Q6P1D7 Gm2594-201ENSMUST00000214774 742 ntBASIC18.1■□□□□ 0.49
Slx4Q6P1D7 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Slx4Q6P1D7 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slx4Q6P1D7 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Slx4Q6P1D7 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Slx4Q6P1D7 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slx4Q6P1D7 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Slx4Q6P1D7 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Slx4Q6P1D7 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Slx4Q6P1D7 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC18.09■□□□□ 0.49
Slx4Q6P1D7 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slx4Q6P1D7 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Slx4Q6P1D7 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slx4Q6P1D7 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slx4Q6P1D7 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Slx4Q6P1D7 Gm14234-201ENSMUST00000119539 845 ntBASIC18.09■□□□□ 0.49
Slx4Q6P1D7 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC18.09■□□□□ 0.49
Slx4Q6P1D7 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC18.09■□□□□ 0.49
Slx4Q6P1D7 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Slx4Q6P1D7 Gm26047-201ENSMUST00000157308 113 ntBASIC18.09■□□□□ 0.49
Slx4Q6P1D7 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Slx4Q6P1D7 Gm42511-201ENSMUST00000196160 234 ntBASIC18.09■□□□□ 0.49
Slx4Q6P1D7 Gm26047-202ENSMUST00000198840 115 ntBASIC18.09■□□□□ 0.49
Slx4Q6P1D7 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC18.09■□□□□ 0.49
Slx4Q6P1D7 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Slx4Q6P1D7 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC18.09■□□□□ 0.49
Slx4Q6P1D7 AC162932.1-201ENSMUST00000219209 872 ntBASIC18.09■□□□□ 0.49
Slx4Q6P1D7 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slx4Q6P1D7 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slx4Q6P1D7 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Slx4Q6P1D7 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slx4Q6P1D7 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slx4Q6P1D7 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slx4Q6P1D7 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Slx4Q6P1D7 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC18.09■□□□□ 0.49
Slx4Q6P1D7 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Slx4Q6P1D7 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slx4Q6P1D7 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slx4Q6P1D7 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slx4Q6P1D7 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slx4Q6P1D7 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slx4Q6P1D7 Rab3c-202ENSMUST00000223922 2398 ntBASIC18.09■□□□□ 0.49
Slx4Q6P1D7 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Slx4Q6P1D7 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Slx4Q6P1D7 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Slx4Q6P1D7 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.49
Slx4Q6P1D7 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC18.08■□□□□ 0.49
Slx4Q6P1D7 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC18.08■□□□□ 0.49
Slx4Q6P1D7 Gm26272-201ENSMUST00000179241 132 ntBASIC18.08■□□□□ 0.49
Slx4Q6P1D7 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Slx4Q6P1D7 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Slx4Q6P1D7 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Slx4Q6P1D7 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Slx4Q6P1D7 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Slx4Q6P1D7 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Slx4Q6P1D7 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
Slx4Q6P1D7 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Slx4Q6P1D7 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Slx4Q6P1D7 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Slx4Q6P1D7 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC18.08■□□□□ 0.49
Slx4Q6P1D7 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Slx4Q6P1D7 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Slx4Q6P1D7 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Slx4Q6P1D7 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Slx4Q6P1D7 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Slx4Q6P1D7 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slx4Q6P1D7 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slx4Q6P1D7 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slx4Q6P1D7 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slx4Q6P1D7 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slx4Q6P1D7 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slx4Q6P1D7 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC18.08■□□□□ 0.48
Slx4Q6P1D7 AC122840.1-201ENSMUST00000220915 3334 ntBASIC18.08■□□□□ 0.48
Slx4Q6P1D7 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms