Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Scn9aQ62205 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.19
Scn9aQ62205 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.83□□□□□ -0.2
Scn9aQ62205 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn9aQ62205 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Scn9aQ62205 Gm8146-201ENSMUST00000192106 1847 ntBASIC13.83□□□□□ -0.2
Scn9aQ62205 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn9aQ62205 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Scn9aQ62205 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn9aQ62205 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Scn9aQ62205 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn9aQ62205 Gm25562-201ENSMUST00000104608 133 ntBASIC13.83□□□□□ -0.2
Scn9aQ62205 Gm4294-201ENSMUST00000105169 614 ntBASIC13.83□□□□□ -0.2
Scn9aQ62205 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Scn9aQ62205 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn9aQ62205 Gm12389-201ENSMUST00000117696 418 ntBASIC13.83□□□□□ -0.2
Scn9aQ62205 Gm15196-201ENSMUST00000121406 482 ntBASIC13.83□□□□□ -0.2
Scn9aQ62205 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn9aQ62205 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC13.83□□□□□ -0.2
Scn9aQ62205 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Scn9aQ62205 Gm9162-201ENSMUST00000182081 991 ntBASIC13.83□□□□□ -0.2
Scn9aQ62205 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Scn9aQ62205 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.83□□□□□ -0.2
Scn9aQ62205 Gm7525-201ENSMUST00000219425 454 ntBASIC13.83□□□□□ -0.2
Scn9aQ62205 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC13.83□□□□□ -0.2
Scn9aQ62205 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn9aQ62205 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn9aQ62205 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn9aQ62205 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn9aQ62205 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Scn9aQ62205 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn9aQ62205 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Scn9aQ62205 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn9aQ62205 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Scn9aQ62205 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn9aQ62205 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Scn9aQ62205 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn9aQ62205 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Scn9aQ62205 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
Scn9aQ62205 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn9aQ62205 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Scn9aQ62205 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn9aQ62205 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn9aQ62205 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scn9aQ62205 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn9aQ62205 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn9aQ62205 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn9aQ62205 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scn9aQ62205 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Scn9aQ62205 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn9aQ62205 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn9aQ62205 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Scn9aQ62205 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scn9aQ62205 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scn9aQ62205 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scn9aQ62205 Gm26047-201ENSMUST00000157308 113 ntBASIC13.82□□□□□ -0.2
Scn9aQ62205 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC13.82□□□□□ -0.2
Scn9aQ62205 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC13.82□□□□□ -0.2
Scn9aQ62205 Gm5267-201ENSMUST00000191574 1045 ntBASIC13.82□□□□□ -0.2
Scn9aQ62205 Gm26047-202ENSMUST00000198840 115 ntBASIC13.82□□□□□ -0.2
Scn9aQ62205 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC13.82□□□□□ -0.2
Scn9aQ62205 Gm7238-201ENSMUST00000206467 973 ntBASIC13.82□□□□□ -0.2
Scn9aQ62205 Gm2448-201ENSMUST00000207080 559 ntBASIC13.82□□□□□ -0.2
Scn9aQ62205 AC142266.1-201ENSMUST00000228107 415 ntBASIC13.82□□□□□ -0.2
Scn9aQ62205 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn9aQ62205 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn9aQ62205 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scn9aQ62205 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Scn9aQ62205 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn9aQ62205 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn9aQ62205 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn9aQ62205 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn9aQ62205 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn9aQ62205 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scn9aQ62205 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn9aQ62205 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Scn9aQ62205 AC138329.2-201ENSMUST00000225579 1842 ntBASIC13.82□□□□□ -0.2
Scn9aQ62205 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Scn9aQ62205 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn9aQ62205 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn9aQ62205 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn9aQ62205 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn9aQ62205 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn9aQ62205 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn9aQ62205 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn9aQ62205 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn9aQ62205 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn9aQ62205 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn9aQ62205 Gm14234-201ENSMUST00000119539 845 ntBASIC13.82□□□□□ -0.2
Scn9aQ62205 Gm25226-201ENSMUST00000158198 123 ntBASIC13.82□□□□□ -0.2
Scn9aQ62205 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scn9aQ62205 Gm37197-201ENSMUST00000195607 401 ntBASIC13.82□□□□□ -0.2
Scn9aQ62205 Gm45094-201ENSMUST00000207013 617 ntBASIC13.82□□□□□ -0.2
Scn9aQ62205 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC13.82□□□□□ -0.2
Scn9aQ62205 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn9aQ62205 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn9aQ62205 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Scn9aQ62205 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn9aQ62205 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn9aQ62205 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms