Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rai1Q61818 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rai1Q61818 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rai1Q61818 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Rai1Q61818 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Rai1Q61818 Gm25053-201ENSMUST00000103982 133 ntBASIC11.41□□□□□ -0.58
Rai1Q61818 Gm25922-201ENSMUST00000104281 130 ntBASIC11.41□□□□□ -0.58
Rai1Q61818 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Rai1Q61818 Gm14071-201ENSMUST00000117817 509 ntBASIC11.41□□□□□ -0.58
Rai1Q61818 Gm24679-201ENSMUST00000158762 111 ntBASIC11.41□□□□□ -0.58
Rai1Q61818 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Rai1Q61818 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rai1Q61818 Gm25053-202ENSMUST00000199731 132 ntBASIC11.41□□□□□ -0.58
Rai1Q61818 AC168279.1-201ENSMUST00000214611 382 ntBASIC11.41□□□□□ -0.58
Rai1Q61818 CT030653.1-201ENSMUST00000224382 1279 ntBASIC11.41□□□□□ -0.58
Rai1Q61818 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.41□□□□□ -0.58
Rai1Q61818 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Rai1Q61818 Gm5805-201ENSMUST00000072779 456 ntBASIC11.41□□□□□ -0.58
Rai1Q61818 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rai1Q61818 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Rai1Q61818 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rai1Q61818 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rai1Q61818 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.41□□□□□ -0.58
Rai1Q61818 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rai1Q61818 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rai1Q61818 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.41□□□□□ -0.58
Rai1Q61818 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rai1Q61818 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.41□□□□□ -0.58
Rai1Q61818 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rai1Q61818 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rai1Q61818 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Rai1Q61818 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rai1Q61818 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rai1Q61818 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rai1Q61818 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rai1Q61818 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rai1Q61818 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rai1Q61818 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rai1Q61818 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Rai1Q61818 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rai1Q61818 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rai1Q61818 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rai1Q61818 Gm13351-201ENSMUST00000118087 414 ntBASIC11.4□□□□□ -0.58
Rai1Q61818 Gm15374-201ENSMUST00000119313 844 ntBASIC11.4□□□□□ -0.58
Rai1Q61818 Gm14395-201ENSMUST00000120494 563 ntBASIC11.4□□□□□ -0.58
Rai1Q61818 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rai1Q61818 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.4□□□□□ -0.58
Rai1Q61818 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rai1Q61818 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC11.4□□□□□ -0.58
Rai1Q61818 Mir8093-201ENSMUST00000185043 137 ntBASIC11.4□□□□□ -0.58
Rai1Q61818 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.4□□□□□ -0.58
Rai1Q61818 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.4□□□□□ -0.58
Rai1Q61818 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.4□□□□□ -0.58
Rai1Q61818 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rai1Q61818 Gm8436-201ENSMUST00000210152 1080 ntBASIC11.4□□□□□ -0.58
Rai1Q61818 Gm5749-201ENSMUST00000210673 1090 ntBASIC11.4□□□□□ -0.58
Rai1Q61818 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC11.4□□□□□ -0.58
Rai1Q61818 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.4□□□□□ -0.58
Rai1Q61818 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rai1Q61818 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Rai1Q61818 Gm25201-201ENSMUST00000083093 170 ntBASIC11.4□□□□□ -0.58
Rai1Q61818 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.4□□□□□ -0.58
Rai1Q61818 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rai1Q61818 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Rai1Q61818 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rai1Q61818 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rai1Q61818 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rai1Q61818 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC11.4□□□□□ -0.58
Rai1Q61818 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rai1Q61818 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.4□□□□□ -0.58
Rai1Q61818 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rai1Q61818 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rai1Q61818 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rai1Q61818 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rai1Q61818 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC11.4□□□□□ -0.59
Rai1Q61818 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Rai1Q61818 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC11.4□□□□□ -0.59
Rai1Q61818 Gm26047-201ENSMUST00000157308 113 ntBASIC11.4□□□□□ -0.59
Rai1Q61818 Gm17709-201ENSMUST00000174536 1096 ntBASIC11.4□□□□□ -0.59
Rai1Q61818 Gm18201-201ENSMUST00000174735 875 ntBASIC11.4□□□□□ -0.59
Rai1Q61818 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Rai1Q61818 Gm9884-201ENSMUST00000194343 1222 ntBASIC11.4□□□□□ -0.59
Rai1Q61818 Gm26047-202ENSMUST00000198840 115 ntBASIC11.4□□□□□ -0.59
Rai1Q61818 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Rai1Q61818 Gm39288-201ENSMUST00000210554 446 ntBASIC11.4□□□□□ -0.59
Rai1Q61818 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC11.4□□□□□ -0.59
Rai1Q61818 Gm18514-201ENSMUST00000218980 436 ntBASIC11.4□□□□□ -0.59
Rai1Q61818 CT573086.4-201ENSMUST00000226729 342 ntBASIC11.4□□□□□ -0.59
Rai1Q61818 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rai1Q61818 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rai1Q61818 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rai1Q61818 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rai1Q61818 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rai1Q61818 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.4□□□□□ -0.59
Rai1Q61818 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Rai1Q61818 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rai1Q61818 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rai1Q61818 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Rai1Q61818 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rai1Q61818 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 2020.6 ms