Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm10419-201ENSMUST00000100944 1671 ntTSL 2 BASIC9.15□□□□□ -0.94
Foxc1Q61572 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Foxc1Q61572 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC9.15□□□□□ -0.94
Foxc1Q61572 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Foxc1Q61572 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Foxc1Q61572 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Foxc1Q61572 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Foxc1Q61572 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Foxc1Q61572 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Foxc1Q61572 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Foxc1Q61572 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
Foxc1Q61572 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC9.15□□□□□ -0.95
Foxc1Q61572 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Foxc1Q61572 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
Foxc1Q61572 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Foxc1Q61572 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Foxc1Q61572 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Foxc1Q61572 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC9.15□□□□□ -0.95
Foxc1Q61572 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Foxc1Q61572 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Foxc1Q61572 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
Foxc1Q61572 Gm44775-201ENSMUST00000207266 1456 ntBASIC9.15□□□□□ -0.95
Foxc1Q61572 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Foxc1Q61572 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Foxc1Q61572 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC9.15□□□□□ -0.95
Foxc1Q61572 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC9.14□□□□□ -0.95
Foxc1Q61572 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Foxc1Q61572 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Foxc1Q61572 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Foxc1Q61572 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC9.14□□□□□ -0.95
Foxc1Q61572 Dopey2-207ENSMUST00000227156 7340 ntBASIC9.14□□□□□ -0.95
Foxc1Q61572 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Foxc1Q61572 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC9.14□□□□□ -0.95
Foxc1Q61572 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC9.14□□□□□ -0.95
Foxc1Q61572 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Foxc1Q61572 Gm42736-201ENSMUST00000200723 1353 ntBASIC9.14□□□□□ -0.95
Foxc1Q61572 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Foxc1Q61572 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Foxc1Q61572 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Foxc1Q61572 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Foxc1Q61572 Gm44094-201ENSMUST00000204703 2030 ntBASIC9.14□□□□□ -0.95
Foxc1Q61572 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Foxc1Q61572 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Foxc1Q61572 Gm8793-201ENSMUST00000183069 1303 ntBASIC9.14□□□□□ -0.95
Foxc1Q61572 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Foxc1Q61572 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC9.14□□□□□ -0.95
Foxc1Q61572 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Foxc1Q61572 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC9.14□□□□□ -0.95
Foxc1Q61572 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Foxc1Q61572 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Foxc1Q61572 Gm25414-201ENSMUST00000101814 107 ntBASIC9.14□□□□□ -0.95
Foxc1Q61572 Gm22018-201ENSMUST00000104357 131 ntBASIC9.14□□□□□ -0.95
Foxc1Q61572 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC9.14□□□□□ -0.95
Foxc1Q61572 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC9.14□□□□□ -0.95
Foxc1Q61572 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Foxc1Q61572 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC9.14□□□□□ -0.95
Foxc1Q61572 Gm11793-201ENSMUST00000120433 981 ntBASIC9.14□□□□□ -0.95
Foxc1Q61572 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC9.14□□□□□ -0.95
Foxc1Q61572 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC9.14□□□□□ -0.95
Foxc1Q61572 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
Foxc1Q61572 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC9.14□□□□□ -0.95
Foxc1Q61572 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Foxc1Q61572 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
Foxc1Q61572 Gm15279-201ENSMUST00000155593 288 ntBASIC9.14□□□□□ -0.95
Foxc1Q61572 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC9.14□□□□□ -0.95
Foxc1Q61572 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Foxc1Q61572 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC9.14□□□□□ -0.95
Foxc1Q61572 Gm7783-201ENSMUST00000204795 781 ntBASIC9.14□□□□□ -0.95
Foxc1Q61572 Gm45078-201ENSMUST00000205343 546 ntBASIC9.14□□□□□ -0.95
Foxc1Q61572 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Foxc1Q61572 Gm17823-201ENSMUST00000217830 1006 ntBASIC9.14□□□□□ -0.95
Foxc1Q61572 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC9.14□□□□□ -0.95
Foxc1Q61572 Gm6653-201ENSMUST00000218063 1288 ntBASIC9.14□□□□□ -0.95
Foxc1Q61572 Gm5781-201ENSMUST00000219792 443 ntBASIC9.14□□□□□ -0.95
Foxc1Q61572 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC9.14□□□□□ -0.95
Foxc1Q61572 AC154305.4-201ENSMUST00000224520 614 ntBASIC9.14□□□□□ -0.95
Foxc1Q61572 AC069562.3-201ENSMUST00000225387 587 ntBASIC9.14□□□□□ -0.95
Foxc1Q61572 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Foxc1Q61572 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Foxc1Q61572 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC9.14□□□□□ -0.95
Foxc1Q61572 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Foxc1Q61572 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC9.14□□□□□ -0.95
Foxc1Q61572 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Foxc1Q61572 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Foxc1Q61572 Gm9544-201ENSMUST00000223349 2482 ntBASIC9.14□□□□□ -0.95
Foxc1Q61572 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Foxc1Q61572 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Foxc1Q61572 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Foxc1Q61572 Gm18881-201ENSMUST00000220450 1545 ntBASIC9.14□□□□□ -0.95
Foxc1Q61572 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Foxc1Q61572 Zwilch-209ENSMUST00000176299 1831 ntTSL 5 BASIC9.14□□□□□ -0.95
Foxc1Q61572 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Foxc1Q61572 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Foxc1Q61572 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Foxc1Q61572 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Foxc1Q61572 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Foxc1Q61572 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Foxc1Q61572 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Foxc1Q61572 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Foxc1Q61572 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms