Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.19□□□□□ -0.62
Sox17Q61473 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox17Q61473 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox17Q61473 Gm6180-201ENSMUST00000065243 498 ntBASIC11.19□□□□□ -0.62
Sox17Q61473 Gm10076-201ENSMUST00000073238 384 ntBASIC11.19□□□□□ -0.62
Sox17Q61473 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox17Q61473 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox17Q61473 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox17Q61473 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox17Q61473 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox17Q61473 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.19□□□□□ -0.62
Sox17Q61473 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox17Q61473 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox17Q61473 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Sox17Q61473 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.19□□□□□ -0.62
Sox17Q61473 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Sox17Q61473 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sox17Q61473 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Sox17Q61473 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox17Q61473 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sox17Q61473 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Sox17Q61473 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sox17Q61473 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox17Q61473 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox17Q61473 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sox17Q61473 Btrc-209ENSMUST00000224478 2194 ntBASIC11.18□□□□□ -0.62
Sox17Q61473 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
Sox17Q61473 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox17Q61473 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sox17Q61473 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox17Q61473 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sox17Q61473 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.18□□□□□ -0.62
Sox17Q61473 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox17Q61473 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Sox17Q61473 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox17Q61473 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.18□□□□□ -0.62
Sox17Q61473 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Sox17Q61473 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.18□□□□□ -0.62
Sox17Q61473 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sox17Q61473 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.18□□□□□ -0.62
Sox17Q61473 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.18□□□□□ -0.62
Sox17Q61473 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sox17Q61473 Gm9908-201ENSMUST00000211534 448 ntBASIC11.18□□□□□ -0.62
Sox17Q61473 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox17Q61473 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox17Q61473 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Sox17Q61473 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox17Q61473 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Sox17Q61473 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.18□□□□□ -0.62
Sox17Q61473 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox17Q61473 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox17Q61473 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sox17Q61473 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Sox17Q61473 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox17Q61473 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.18□□□□□ -0.62
Sox17Q61473 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sox17Q61473 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Sox17Q61473 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox17Q61473 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.18□□□□□ -0.62
Sox17Q61473 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox17Q61473 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox17Q61473 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.18□□□□□ -0.62
Sox17Q61473 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox17Q61473 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox17Q61473 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.18□□□□□ -0.62
Sox17Q61473 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox17Q61473 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.17□□□□□ -0.62
Sox17Q61473 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox17Q61473 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Sox17Q61473 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox17Q61473 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox17Q61473 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Sox17Q61473 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox17Q61473 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox17Q61473 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox17Q61473 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox17Q61473 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox17Q61473 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Sox17Q61473 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox17Q61473 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox17Q61473 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox17Q61473 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox17Q61473 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox17Q61473 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.17□□□□□ -0.62
Sox17Q61473 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC11.17□□□□□ -0.62
Sox17Q61473 Gm13342-201ENSMUST00000121055 207 ntBASIC11.17□□□□□ -0.62
Sox17Q61473 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox17Q61473 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox17Q61473 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox17Q61473 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox17Q61473 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.17□□□□□ -0.62
Sox17Q61473 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.17□□□□□ -0.62
Sox17Q61473 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox17Q61473 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.17□□□□□ -0.62
Sox17Q61473 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Sox17Q61473 Gm45925-201ENSMUST00000218882 744 ntBASIC11.17□□□□□ -0.62
Sox17Q61473 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox17Q61473 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.17□□□□□ -0.62
Sox17Q61473 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox17Q61473 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms