Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.06□□□□□ -0.48
Six4Q61321 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six4Q61321 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six4Q61321 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six4Q61321 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Six4Q61321 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Six4Q61321 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Six4Q61321 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six4Q61321 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Six4Q61321 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six4Q61321 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.06□□□□□ -0.48
Six4Q61321 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six4Q61321 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Six4Q61321 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.06□□□□□ -0.48
Six4Q61321 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Six4Q61321 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.06□□□□□ -0.48
Six4Q61321 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six4Q61321 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six4Q61321 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.06□□□□□ -0.48
Six4Q61321 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six4Q61321 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six4Q61321 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Six4Q61321 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six4Q61321 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Six4Q61321 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Six4Q61321 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Six4Q61321 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Six4Q61321 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.05□□□□□ -0.48
Six4Q61321 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Six4Q61321 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Six4Q61321 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Six4Q61321 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Six4Q61321 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Six4Q61321 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.05□□□□□ -0.48
Six4Q61321 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Six4Q61321 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Six4Q61321 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Six4Q61321 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Six4Q61321 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Six4Q61321 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Six4Q61321 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Six4Q61321 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.05□□□□□ -0.48
Six4Q61321 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Six4Q61321 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.05□□□□□ -0.48
Six4Q61321 Gm23596-201ENSMUST00000104304 132 ntBASIC12.05□□□□□ -0.48
Six4Q61321 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.05□□□□□ -0.48
Six4Q61321 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.05□□□□□ -0.48
Six4Q61321 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Six4Q61321 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Six4Q61321 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.05□□□□□ -0.48
Six4Q61321 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Six4Q61321 Gm27552-201ENSMUST00000183351 62 ntBASIC12.05□□□□□ -0.48
Six4Q61321 Gm27844-201ENSMUST00000183613 62 ntBASIC12.05□□□□□ -0.48
Six4Q61321 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.05□□□□□ -0.48
Six4Q61321 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.05□□□□□ -0.48
Six4Q61321 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Six4Q61321 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.05□□□□□ -0.48
Six4Q61321 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Six4Q61321 Gm26448-201ENSMUST00000082446 203 ntBASIC12.05□□□□□ -0.48
Six4Q61321 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Six4Q61321 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Six4Q61321 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Six4Q61321 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Six4Q61321 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Six4Q61321 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Six4Q61321 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Six4Q61321 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Six4Q61321 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Six4Q61321 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.05□□□□□ -0.48
Six4Q61321 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Six4Q61321 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Six4Q61321 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Six4Q61321 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Six4Q61321 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Six4Q61321 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Six4Q61321 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Six4Q61321 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Six4Q61321 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.04□□□□□ -0.48
Six4Q61321 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Six4Q61321 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Six4Q61321 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.04□□□□□ -0.48
Six4Q61321 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.04□□□□□ -0.48
Six4Q61321 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Six4Q61321 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Six4Q61321 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Six4Q61321 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Six4Q61321 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Six4Q61321 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Six4Q61321 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.04□□□□□ -0.48
Six4Q61321 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Six4Q61321 Gm11660-201ENSMUST00000120955 412 ntBASIC12.04□□□□□ -0.48
Six4Q61321 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.04□□□□□ -0.48
Six4Q61321 Gm4310-201ENSMUST00000177847 889 ntBASIC12.04□□□□□ -0.48
Six4Q61321 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Six4Q61321 Mir7677-201ENSMUST00000184226 67 ntBASIC12.04□□□□□ -0.48
Six4Q61321 Gm28450-201ENSMUST00000187349 638 ntBASIC12.04□□□□□ -0.48
Six4Q61321 Gm3332-201ENSMUST00000189337 928 ntBASIC12.04□□□□□ -0.48
Six4Q61321 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.04□□□□□ -0.48
Six4Q61321 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Six4Q61321 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms