Protein–RNA interactions for Protein: Q60803

Traf3, TNF receptor-associated factor 3, mousemouse

Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf3Q60803 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Traf3Q60803 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Traf3Q60803 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Traf3Q60803 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.41
Traf3Q60803 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Traf3Q60803 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.52□□□□□ -0.41
Traf3Q60803 Gm9192-201ENSMUST00000183221 985 ntBASIC12.52□□□□□ -0.41
Traf3Q60803 Gm28450-201ENSMUST00000187349 638 ntBASIC12.52□□□□□ -0.41
Traf3Q60803 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.52□□□□□ -0.41
Traf3Q60803 Gm19287-201ENSMUST00000203190 358 ntBASIC12.52□□□□□ -0.41
Traf3Q60803 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.52□□□□□ -0.41
Traf3Q60803 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Traf3Q60803 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.52□□□□□ -0.41
Traf3Q60803 Gm9797-202ENSMUST00000218003 294 ntBASIC12.52□□□□□ -0.41
Traf3Q60803 Gm18730-201ENSMUST00000218038 343 ntBASIC12.52□□□□□ -0.41
Traf3Q60803 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.52□□□□□ -0.41
Traf3Q60803 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Traf3Q60803 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Traf3Q60803 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Traf3Q60803 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.52□□□□□ -0.41
Traf3Q60803 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.52□□□□□ -0.41
Traf3Q60803 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Traf3Q60803 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Traf3Q60803 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Traf3Q60803 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Traf3Q60803 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.52□□□□□ -0.41
Traf3Q60803 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Traf3Q60803 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Traf3Q60803 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Traf3Q60803 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Traf3Q60803 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Traf3Q60803 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Traf3Q60803 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Traf3Q60803 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Traf3Q60803 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Traf3Q60803 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Traf3Q60803 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.51□□□□□ -0.41
Traf3Q60803 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Traf3Q60803 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Traf3Q60803 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Traf3Q60803 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Traf3Q60803 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Traf3Q60803 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Traf3Q60803 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Traf3Q60803 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Traf3Q60803 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Traf3Q60803 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Traf3Q60803 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Traf3Q60803 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Traf3Q60803 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Traf3Q60803 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Traf3Q60803 Gm23200-201ENSMUST00000104379 132 ntBASIC12.51□□□□□ -0.41
Traf3Q60803 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Traf3Q60803 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Traf3Q60803 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.51□□□□□ -0.41
Traf3Q60803 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Traf3Q60803 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.51□□□□□ -0.41
Traf3Q60803 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Traf3Q60803 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.51□□□□□ -0.41
Traf3Q60803 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Traf3Q60803 Mir7677-201ENSMUST00000184226 67 ntBASIC12.51□□□□□ -0.41
Traf3Q60803 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.51□□□□□ -0.41
Traf3Q60803 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Traf3Q60803 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.51□□□□□ -0.41
Traf3Q60803 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Traf3Q60803 Gm26448-201ENSMUST00000082446 203 ntBASIC12.51□□□□□ -0.41
Traf3Q60803 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Traf3Q60803 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Traf3Q60803 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Traf3Q60803 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.51□□□□□ -0.41
Traf3Q60803 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.51□□□□□ -0.41
Traf3Q60803 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Traf3Q60803 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.51□□□□□ -0.41
Traf3Q60803 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Traf3Q60803 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Traf3Q60803 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Traf3Q60803 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Traf3Q60803 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Traf3Q60803 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Traf3Q60803 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.51□□□□□ -0.41
Traf3Q60803 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Traf3Q60803 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Traf3Q60803 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Traf3Q60803 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.5□□□□□ -0.41
Traf3Q60803 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Traf3Q60803 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Traf3Q60803 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Traf3Q60803 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.5□□□□□ -0.41
Traf3Q60803 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Traf3Q60803 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Traf3Q60803 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.5□□□□□ -0.41
Traf3Q60803 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.5□□□□□ -0.41
Traf3Q60803 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Traf3Q60803 Gm23596-201ENSMUST00000104304 132 ntBASIC12.5□□□□□ -0.41
Traf3Q60803 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.5□□□□□ -0.41
Traf3Q60803 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.5□□□□□ -0.41
Traf3Q60803 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Traf3Q60803 Gm11660-201ENSMUST00000120955 412 ntBASIC12.5□□□□□ -0.41
Traf3Q60803 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.5□□□□□ -0.41
Traf3Q60803 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms