Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm18782-201ENSMUST00000209023 1399 ntBASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm5904-201ENSMUST00000210286 865 ntBASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm37580-201ENSMUST00000192408 2800 ntBASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 AC124577.2-201ENSMUST00000217413 2420 ntBASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm4271-201ENSMUST00000174444 973 ntBASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm5706-201ENSMUST00000181525 993 ntBASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 AL593843.1-201ENSMUST00000195891 145 ntBASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm44405-201ENSMUST00000198952 126 ntBASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm10012-201ENSMUST00000078252 192 ntBASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm36957-201ENSMUST00000192982 2824 ntBASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms