Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 AC134335.2-201ENSMUST00000227660 440 ntBASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Gm42031-201ENSMUST00000209823 1885 ntTSL 5 BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 AC131029.1-201ENSMUST00000226391 2929 ntBASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Grb10-202ENSMUST00000109653 2048 ntTSL 5 BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Olfr764-ps1-201ENSMUST00000204763 2854 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Cfap61-204ENSMUST00000126415 2256 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Trav3-3Q5R1C3 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav3-3Q5R1C3 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms