Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nlrc4Q3UP24 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Nlrc4Q3UP24 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.61□□□□□ -0.39
Nlrc4Q3UP24 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nlrc4Q3UP24 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nlrc4Q3UP24 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.61□□□□□ -0.39
Nlrc4Q3UP24 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Nlrc4Q3UP24 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Nlrc4Q3UP24 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nlrc4Q3UP24 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Nlrc4Q3UP24 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Nlrc4Q3UP24 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nlrc4Q3UP24 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nlrc4Q3UP24 Gm23596-201ENSMUST00000104304 132 ntBASIC12.61□□□□□ -0.39
Nlrc4Q3UP24 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nlrc4Q3UP24 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nlrc4Q3UP24 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.61□□□□□ -0.39
Nlrc4Q3UP24 Gm25732-201ENSMUST00000175168 60 ntBASIC12.61□□□□□ -0.39
Nlrc4Q3UP24 Gm43184-201ENSMUST00000197247 542 ntBASIC12.61□□□□□ -0.39
Nlrc4Q3UP24 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nlrc4Q3UP24 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
Nlrc4Q3UP24 Gm9797-202ENSMUST00000218003 294 ntBASIC12.61□□□□□ -0.39
Nlrc4Q3UP24 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.61□□□□□ -0.39
Nlrc4Q3UP24 Gm26448-201ENSMUST00000082446 203 ntBASIC12.61□□□□□ -0.39
Nlrc4Q3UP24 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nlrc4Q3UP24 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nlrc4Q3UP24 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nlrc4Q3UP24 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Nlrc4Q3UP24 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nlrc4Q3UP24 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Nlrc4Q3UP24 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.61□□□□□ -0.39
Nlrc4Q3UP24 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nlrc4Q3UP24 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nlrc4Q3UP24 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nlrc4Q3UP24 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nlrc4Q3UP24 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nlrc4Q3UP24 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nlrc4Q3UP24 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nlrc4Q3UP24 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.6□□□□□ -0.39
Nlrc4Q3UP24 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nlrc4Q3UP24 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nlrc4Q3UP24 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nlrc4Q3UP24 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Nlrc4Q3UP24 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Nlrc4Q3UP24 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nlrc4Q3UP24 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nlrc4Q3UP24 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nlrc4Q3UP24 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nlrc4Q3UP24 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nlrc4Q3UP24 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nlrc4Q3UP24 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Nlrc4Q3UP24 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nlrc4Q3UP24 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nlrc4Q3UP24 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.6□□□□□ -0.39
Nlrc4Q3UP24 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nlrc4Q3UP24 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nlrc4Q3UP24 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nlrc4Q3UP24 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nlrc4Q3UP24 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.6□□□□□ -0.39
Nlrc4Q3UP24 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nlrc4Q3UP24 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms