Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.28□□□□□ -0.6
Brf2Q3UAW9 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Brf2Q3UAW9 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.28□□□□□ -0.6
Brf2Q3UAW9 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Brf2Q3UAW9 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Brf2Q3UAW9 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.28□□□□□ -0.6
Brf2Q3UAW9 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Brf2Q3UAW9 Gm14644-201ENSMUST00000116671 647 ntBASIC11.28□□□□□ -0.6
Brf2Q3UAW9 Gm12015-201ENSMUST00000117065 843 ntBASIC11.28□□□□□ -0.6
Brf2Q3UAW9 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.28□□□□□ -0.6
Brf2Q3UAW9 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Brf2Q3UAW9 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Brf2Q3UAW9 Gm38241-201ENSMUST00000192641 898 ntBASIC11.28□□□□□ -0.6
Brf2Q3UAW9 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.28□□□□□ -0.6
Brf2Q3UAW9 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Brf2Q3UAW9 Cts7-204ENSMUST00000225321 1257 ntBASIC11.28□□□□□ -0.6
Brf2Q3UAW9 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.28□□□□□ -0.6
Brf2Q3UAW9 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Brf2Q3UAW9 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Brf2Q3UAW9 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Brf2Q3UAW9 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Brf2Q3UAW9 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Brf2Q3UAW9 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Brf2Q3UAW9 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Brf2Q3UAW9 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Brf2Q3UAW9 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Brf2Q3UAW9 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.28□□□□□ -0.6
Brf2Q3UAW9 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Brf2Q3UAW9 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Brf2Q3UAW9 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Brf2Q3UAW9 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Brf2Q3UAW9 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Brf2Q3UAW9 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Brf2Q3UAW9 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Brf2Q3UAW9 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Brf2Q3UAW9 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.27□□□□□ -0.6
Brf2Q3UAW9 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.27□□□□□ -0.6
Brf2Q3UAW9 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Brf2Q3UAW9 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.27□□□□□ -0.6
Brf2Q3UAW9 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Brf2Q3UAW9 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Brf2Q3UAW9 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.27□□□□□ -0.61
Brf2Q3UAW9 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Brf2Q3UAW9 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Brf2Q3UAW9 Gm14109-201ENSMUST00000118814 309 ntBASIC11.27□□□□□ -0.61
Brf2Q3UAW9 Gm5419-201ENSMUST00000119301 527 ntBASIC11.27□□□□□ -0.61
Brf2Q3UAW9 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Brf2Q3UAW9 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Brf2Q3UAW9 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Brf2Q3UAW9 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Brf2Q3UAW9 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Brf2Q3UAW9 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Brf2Q3UAW9 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Brf2Q3UAW9 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.27□□□□□ -0.61
Brf2Q3UAW9 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.27□□□□□ -0.61
Brf2Q3UAW9 Gm19187-201ENSMUST00000206781 892 ntBASIC11.27□□□□□ -0.61
Brf2Q3UAW9 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Brf2Q3UAW9 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Brf2Q3UAW9 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Brf2Q3UAW9 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Brf2Q3UAW9 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Brf2Q3UAW9 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Brf2Q3UAW9 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Brf2Q3UAW9 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Brf2Q3UAW9 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Brf2Q3UAW9 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Brf2Q3UAW9 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Brf2Q3UAW9 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.27□□□□□ -0.61
Brf2Q3UAW9 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.27□□□□□ -0.61
Brf2Q3UAW9 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.27□□□□□ -0.61
Brf2Q3UAW9 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Brf2Q3UAW9 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.27□□□□□ -0.61
Brf2Q3UAW9 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Gm9136-201ENSMUST00000193368 454 ntBASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Brf2Q3UAW9 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms