Protein–RNA interactions for Protein: Q3U898

Cops9, COP9 signalosome complex subunit 9, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops9Q3U898 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Cops9Q3U898 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cops9Q3U898 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC8.17□□□□□ -1.1
Cops9Q3U898 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cops9Q3U898 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cops9Q3U898 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cops9Q3U898 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cops9Q3U898 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cops9Q3U898 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Cops9Q3U898 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC8.16□□□□□ -1.1
Cops9Q3U898 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cops9Q3U898 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cops9Q3U898 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cops9Q3U898 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Cops9Q3U898 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cops9Q3U898 Zfp398-202ENSMUST00000114598 8328 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Cops9Q3U898 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Cops9Q3U898 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cops9Q3U898 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cops9Q3U898 Gm5303-201ENSMUST00000117943 1252 ntBASIC8.16□□□□□ -1.1
Cops9Q3U898 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cops9Q3U898 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cops9Q3U898 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Cops9Q3U898 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
Cops9Q3U898 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC8.16□□□□□ -1.1
Cops9Q3U898 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Cops9Q3U898 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Cops9Q3U898 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cops9Q3U898 Tpp2-207ENSMUST00000188313 4631 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cops9Q3U898 Gm17971-201ENSMUST00000190239 806 ntBASIC8.16□□□□□ -1.1
Cops9Q3U898 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Cops9Q3U898 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC8.16□□□□□ -1.1
Cops9Q3U898 Gm19692-201ENSMUST00000203856 2084 ntBASIC8.16□□□□□ -1.1
Cops9Q3U898 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Cops9Q3U898 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Cops9Q3U898 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Cops9Q3U898 Gm14005-209ENSMUST00000224993 1832 ntBASIC8.16□□□□□ -1.1
Cops9Q3U898 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cops9Q3U898 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cops9Q3U898 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cops9Q3U898 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cops9Q3U898 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cops9Q3U898 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cops9Q3U898 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cops9Q3U898 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cops9Q3U898 Ptchd4-201ENSMUST00000048691 6890 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Cops9Q3U898 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Cops9Q3U898 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Cops9Q3U898 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Cops9Q3U898 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cops9Q3U898 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cops9Q3U898 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cops9Q3U898 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cops9Q3U898 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Cops9Q3U898 Nckap5-208ENSMUST00000161954 7090 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cops9Q3U898 Gm43915-201ENSMUST00000203013 5037 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Cops9Q3U898 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Cops9Q3U898 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC8.16□□□□□ -1.1
Cops9Q3U898 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Cops9Q3U898 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Cops9Q3U898 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Cops9Q3U898 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Cops9Q3U898 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Cops9Q3U898 Gm38194-201ENSMUST00000194529 2211 ntBASIC8.15□□□□□ -1.1
Cops9Q3U898 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Cops9Q3U898 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Cops9Q3U898 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Cops9Q3U898 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Cops9Q3U898 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Cops9Q3U898 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC8.15□□□□□ -1.1
Cops9Q3U898 Bcl9-207ENSMUST00000166341 4652 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Cops9Q3U898 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Cops9Q3U898 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Cops9Q3U898 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Cops9Q3U898 Gm15897-201ENSMUST00000117770 1486 ntBASIC8.15□□□□□ -1.1
Cops9Q3U898 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Cops9Q3U898 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Cops9Q3U898 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Cops9Q3U898 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Cops9Q3U898 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Cops9Q3U898 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Cops9Q3U898 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Cops9Q3U898 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Cops9Q3U898 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC8.15□□□□□ -1.1
Cops9Q3U898 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Cops9Q3U898 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Cops9Q3U898 Gm23912-201ENSMUST00000104687 87 ntBASIC8.15□□□□□ -1.1
Cops9Q3U898 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Cops9Q3U898 Gm4204-201ENSMUST00000110798 1231 ntBASIC8.15□□□□□ -1.1
Cops9Q3U898 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Cops9Q3U898 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Cops9Q3U898 Gm15376-201ENSMUST00000122258 783 ntBASIC8.15□□□□□ -1.1
Cops9Q3U898 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Cops9Q3U898 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Cops9Q3U898 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Cops9Q3U898 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC8.15□□□□□ -1.1
Cops9Q3U898 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC8.15□□□□□ -1.1
Cops9Q3U898 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC8.15□□□□□ -1.1
Cops9Q3U898 Cd63-ps-201ENSMUST00000145417 875 ntBASIC8.15□□□□□ -1.1
Cops9Q3U898 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms