Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Mmp25Q3U435 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.28□□□□□ -0.6
Mmp25Q3U435 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Mmp25Q3U435 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Mmp25Q3U435 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Mmp25Q3U435 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Mmp25Q3U435 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Mmp25Q3U435 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Mmp25Q3U435 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Mmp25Q3U435 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Mmp25Q3U435 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Mmp25Q3U435 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Mmp25Q3U435 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Mmp25Q3U435 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Mmp25Q3U435 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Mmp25Q3U435 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Mmp25Q3U435 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Mmp25Q3U435 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Mmp25Q3U435 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Mmp25Q3U435 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Mmp25Q3U435 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Mmp25Q3U435 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Mmp25Q3U435 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Mmp25Q3U435 Gm11509-201ENSMUST00000117358 325 ntBASIC11.27□□□□□ -0.61
Mmp25Q3U435 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.27□□□□□ -0.61
Mmp25Q3U435 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.27□□□□□ -0.61
Mmp25Q3U435 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Mmp25Q3U435 Gm3332-201ENSMUST00000189337 928 ntBASIC11.27□□□□□ -0.61
Mmp25Q3U435 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Mmp25Q3U435 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Mmp25Q3U435 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Mmp25Q3U435 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Mmp25Q3U435 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Mmp25Q3U435 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Mmp25Q3U435 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
Mmp25Q3U435 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Mmp25Q3U435 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Mmp25Q3U435 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Mmp25Q3U435 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Mmp25Q3U435 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.27□□□□□ -0.61
Mmp25Q3U435 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Mmp25Q3U435 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Mmp25Q3U435 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Mmp25Q3U435 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Mmp25Q3U435 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Mmp25Q3U435 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Mmp25Q3U435 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Mmp25Q3U435 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Mmp25Q3U435 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.27□□□□□ -0.61
Mmp25Q3U435 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
Mmp25Q3U435 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Mmp25Q3U435 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Mmp25Q3U435 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Mmp25Q3U435 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Mmp25Q3U435 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Mmp25Q3U435 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Mmp25Q3U435 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Mmp25Q3U435 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Mmp25Q3U435 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Mmp25Q3U435 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Mmp25Q3U435 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Mmp25Q3U435 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Mmp25Q3U435 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Mmp25Q3U435 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.26□□□□□ -0.61
Mmp25Q3U435 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Mmp25Q3U435 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Mmp25Q3U435 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.26□□□□□ -0.61
Mmp25Q3U435 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Mmp25Q3U435 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Mmp25Q3U435 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Mmp25Q3U435 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Mmp25Q3U435 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.26□□□□□ -0.61
Mmp25Q3U435 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Mmp25Q3U435 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Mmp25Q3U435 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Mmp25Q3U435 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Mmp25Q3U435 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Mmp25Q3U435 Gm4909-201ENSMUST00000118749 794 ntBASIC11.26□□□□□ -0.61
Mmp25Q3U435 Gm12217-201ENSMUST00000118858 696 ntBASIC11.26□□□□□ -0.61
Mmp25Q3U435 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.26□□□□□ -0.61
Mmp25Q3U435 Gm12196-201ENSMUST00000120954 262 ntBASIC11.26□□□□□ -0.61
Mmp25Q3U435 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Mmp25Q3U435 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.26□□□□□ -0.61
Mmp25Q3U435 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Mmp25Q3U435 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Mmp25Q3U435 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Mmp25Q3U435 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.26□□□□□ -0.61
Mmp25Q3U435 Gm27552-201ENSMUST00000183351 62 ntBASIC11.26□□□□□ -0.61
Mmp25Q3U435 Gm27844-201ENSMUST00000183613 62 ntBASIC11.26□□□□□ -0.61
Mmp25Q3U435 Mir6927-201ENSMUST00000184494 71 ntBASIC11.26□□□□□ -0.61
Mmp25Q3U435 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Mmp25Q3U435 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Mmp25Q3U435 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.26□□□□□ -0.61
Mmp25Q3U435 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.26□□□□□ -0.61
Mmp25Q3U435 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Mmp25Q3U435 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Mmp25Q3U435 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Mmp25Q3U435 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Mmp25Q3U435 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Mmp25Q3U435 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms