Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Tsga10-208ENSMUST00000193669 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Zfp961-204ENSMUST00000136516 601 ntTSL 2 BASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Gm26913-201ENSMUST00000182391 732 ntBASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Gm40153-201ENSMUST00000197904 637 ntTSL 3 BASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Gm42917-201ENSMUST00000200668 928 ntTSL 3 BASIC6.11□□□□□ -1.43
Ush2AQ2QI47 AC134869.4-202ENSMUST00000224350 837 ntBASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Tex29-201ENSMUST00000033909 822 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Gm42863-201ENSMUST00000197875 2958 ntBASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Fam216b-202ENSMUST00000118785 1447 ntTSL 5 BASIC6.11□□□□□ -1.43
Ush2AQ2QI47 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Calhm1-201ENSMUST00000111813 1047 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Fgf1-203ENSMUST00000117566 418 ntTSL 5 BASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Gm15528-201ENSMUST00000117821 864 ntBASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Gm12817-201ENSMUST00000119622 610 ntBASIC6.11□□□□□ -1.43
Ush2AQ2QI47 4933406K04Rik-201ENSMUST00000124068 1136 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Gm16193-201ENSMUST00000125903 778 ntTSL 3 BASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Elof1-201ENSMUST00000013966 888 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Gm15347-201ENSMUST00000145372 385 ntTSL 3 BASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Tead1-211ENSMUST00000170352 1218 ntTSL 5 BASIC6.11□□□□□ -1.43
Ush2AQ2QI47 CT025538.1-201ENSMUST00000223638 369 ntBASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Ush2AQ2QI47 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Gm11919-201ENSMUST00000117609 721 ntBASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Gm13778-202ENSMUST00000146633 537 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Gm12862-201ENSMUST00000150754 472 ntTSL 5 BASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Ift172-206ENSMUST00000201809 405 ntTSL 5 BASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Gm45308-201ENSMUST00000210610 415 ntBASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ush2AQ2QI47 Tmx2-202ENSMUST00000111664 1926 ntTSL 3 BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Abcc9-205ENSMUST00000204870 1458 ntTSL 2 BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 AC140209.1-203ENSMUST00000227412 1524 ntBASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 AC151836.1-201ENSMUST00000228730 1637 ntBASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Myl7-201ENSMUST00000102921 590 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Gm13592-201ENSMUST00000118148 1010 ntBASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Gm24352-201ENSMUST00000158966 125 ntBASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Gm6665-201ENSMUST00000165131 258 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Pon1-203ENSMUST00000176945 619 ntTSL 5 BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Mir6981-201ENSMUST00000184293 115 ntBASIC6.1□□□□□ -1.43
Ush2AQ2QI47 1110025M09Rik-201ENSMUST00000192082 855 ntBASIC6.1□□□□□ -1.43
Ush2AQ2QI47 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 AC165092.1-201ENSMUST00000224018 486 ntBASIC6.1□□□□□ -1.43
Ush2AQ2QI47 AC162940.1-201ENSMUST00000224745 1167 ntBASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Etfbkmt-201ENSMUST00000047531 1562 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Tmem254c-201ENSMUST00000100818 1066 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Scgb1b30-201ENSMUST00000108083 491 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Gm15661-201ENSMUST00000117390 556 ntBASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 AC154197.1-201ENSMUST00000225136 1382 ntBASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Ush2AQ2QI47 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms