Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col19a1Q0VF58 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Col19a1Q0VF58 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col19a1Q0VF58 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col19a1Q0VF58 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col19a1Q0VF58 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Col19a1Q0VF58 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col19a1Q0VF58 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col19a1Q0VF58 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Col19a1Q0VF58 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col19a1Q0VF58 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col19a1Q0VF58 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col19a1Q0VF58 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col19a1Q0VF58 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col19a1Q0VF58 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Col19a1Q0VF58 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col19a1Q0VF58 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col19a1Q0VF58 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC12.71□□□□□ -0.37
Col19a1Q0VF58 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col19a1Q0VF58 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col19a1Q0VF58 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col19a1Q0VF58 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.71□□□□□ -0.37
Col19a1Q0VF58 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col19a1Q0VF58 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Col19a1Q0VF58 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col19a1Q0VF58 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC12.71□□□□□ -0.37
Col19a1Q0VF58 Gm15610-201ENSMUST00000120584 195 ntBASIC12.71□□□□□ -0.37
Col19a1Q0VF58 Gm16459-201ENSMUST00000121443 686 ntBASIC12.71□□□□□ -0.37
Col19a1Q0VF58 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col19a1Q0VF58 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC12.71□□□□□ -0.37
Col19a1Q0VF58 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col19a1Q0VF58 Gm7741-201ENSMUST00000181445 989 ntBASIC12.71□□□□□ -0.37
Col19a1Q0VF58 Gm5335-201ENSMUST00000182995 1000 ntBASIC12.71□□□□□ -0.37
Col19a1Q0VF58 Gm6644-201ENSMUST00000186507 951 ntBASIC12.71□□□□□ -0.37
Col19a1Q0VF58 Gm19087-201ENSMUST00000191430 946 ntBASIC12.71□□□□□ -0.37
Col19a1Q0VF58 Gm8197-202ENSMUST00000193422 934 ntBASIC12.71□□□□□ -0.37
Col19a1Q0VF58 Gm37452-201ENSMUST00000194416 1160 ntBASIC12.71□□□□□ -0.37
Col19a1Q0VF58 Gm17825-201ENSMUST00000206836 794 ntBASIC12.71□□□□□ -0.37
Col19a1Q0VF58 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC12.71□□□□□ -0.37
Col19a1Q0VF58 CT010506.1-201ENSMUST00000223673 349 ntBASIC12.71□□□□□ -0.37
Col19a1Q0VF58 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Col19a1Q0VF58 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col19a1Q0VF58 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col19a1Q0VF58 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.71□□□□□ -0.37
Col19a1Q0VF58 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Col19a1Q0VF58 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col19a1Q0VF58 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col19a1Q0VF58 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col19a1Q0VF58 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Col19a1Q0VF58 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col19a1Q0VF58 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col19a1Q0VF58 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Col19a1Q0VF58 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col19a1Q0VF58 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col19a1Q0VF58 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col19a1Q0VF58 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col19a1Q0VF58 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col19a1Q0VF58 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col19a1Q0VF58 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col19a1Q0VF58 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col19a1Q0VF58 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Col19a1Q0VF58 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Col19a1Q0VF58 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col19a1Q0VF58 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col19a1Q0VF58 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Col19a1Q0VF58 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col19a1Q0VF58 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Col19a1Q0VF58 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col19a1Q0VF58 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col19a1Q0VF58 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col19a1Q0VF58 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col19a1Q0VF58 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Col19a1Q0VF58 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Col19a1Q0VF58 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col19a1Q0VF58 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Col19a1Q0VF58 Gm14395-201ENSMUST00000120494 563 ntBASIC12.7□□□□□ -0.38
Col19a1Q0VF58 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col19a1Q0VF58 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col19a1Q0VF58 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC12.7□□□□□ -0.38
Col19a1Q0VF58 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.7□□□□□ -0.38
Col19a1Q0VF58 Gm28937-201ENSMUST00000185413 695 ntBASIC12.7□□□□□ -0.38
Col19a1Q0VF58 Gm29400-201ENSMUST00000187208 695 ntBASIC12.7□□□□□ -0.38
Col19a1Q0VF58 Gm28662-201ENSMUST00000188446 695 ntBASIC12.7□□□□□ -0.38
Col19a1Q0VF58 Gm28251-201ENSMUST00000188835 695 ntBASIC12.7□□□□□ -0.38
Col19a1Q0VF58 Gm37318-201ENSMUST00000194325 695 ntBASIC12.7□□□□□ -0.38
Col19a1Q0VF58 Gm38017-201ENSMUST00000194768 695 ntBASIC12.7□□□□□ -0.38
Col19a1Q0VF58 Gm37287-201ENSMUST00000195449 695 ntBASIC12.7□□□□□ -0.38
Col19a1Q0VF58 Gm37793-201ENSMUST00000195548 695 ntBASIC12.7□□□□□ -0.38
Col19a1Q0VF58 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Col19a1Q0VF58 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC12.7□□□□□ -0.38
Col19a1Q0VF58 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC12.7□□□□□ -0.38
Col19a1Q0VF58 CT573047.1-201ENSMUST00000223652 851 ntBASIC12.7□□□□□ -0.38
Col19a1Q0VF58 AC154436.1-201ENSMUST00000227272 782 ntBASIC12.7□□□□□ -0.38
Col19a1Q0VF58 Gm5468-202ENSMUST00000227851 682 ntBASIC12.7□□□□□ -0.38
Col19a1Q0VF58 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col19a1Q0VF58 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col19a1Q0VF58 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col19a1Q0VF58 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col19a1Q0VF58 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col19a1Q0VF58 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms