Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.57□□□□□ -0.4
Cntn3Q07409 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn3Q07409 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn3Q07409 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn3Q07409 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.57□□□□□ -0.4
Cntn3Q07409 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn3Q07409 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn3Q07409 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn3Q07409 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn3Q07409 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cntn3Q07409 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn3Q07409 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.57□□□□□ -0.4
Cntn3Q07409 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.57□□□□□ -0.4
Cntn3Q07409 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn3Q07409 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Cntn3Q07409 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn3Q07409 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn3Q07409 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Cntn3Q07409 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn3Q07409 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn3Q07409 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.57□□□□□ -0.4
Cntn3Q07409 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn3Q07409 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.56□□□□□ -0.4
Cntn3Q07409 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cntn3Q07409 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.56□□□□□ -0.4
Cntn3Q07409 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
Cntn3Q07409 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cntn3Q07409 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.56□□□□□ -0.4
Cntn3Q07409 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cntn3Q07409 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.56□□□□□ -0.4
Cntn3Q07409 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cntn3Q07409 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cntn3Q07409 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cntn3Q07409 Gm26286-201ENSMUST00000104166 134 ntBASIC12.56□□□□□ -0.4
Cntn3Q07409 Gm23596-201ENSMUST00000104304 132 ntBASIC12.56□□□□□ -0.4
Cntn3Q07409 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cntn3Q07409 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cntn3Q07409 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cntn3Q07409 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cntn3Q07409 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cntn3Q07409 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cntn3Q07409 Gm4034-201ENSMUST00000187674 480 ntBASIC12.56□□□□□ -0.4
Cntn3Q07409 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Cntn3Q07409 Gm4157-201ENSMUST00000211647 679 ntBASIC12.56□□□□□ -0.4
Cntn3Q07409 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Cntn3Q07409 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.56□□□□□ -0.4
Cntn3Q07409 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cntn3Q07409 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cntn3Q07409 Gm26448-201ENSMUST00000082446 203 ntBASIC12.56□□□□□ -0.4
Cntn3Q07409 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.56□□□□□ -0.4
Cntn3Q07409 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cntn3Q07409 Map1b-203ENSMUST00000223725 2669 ntBASIC12.56□□□□□ -0.4
Cntn3Q07409 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Cntn3Q07409 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Cntn3Q07409 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cntn3Q07409 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cntn3Q07409 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cntn3Q07409 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cntn3Q07409 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cntn3Q07409 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cntn3Q07409 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cntn3Q07409 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Cntn3Q07409 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cntn3Q07409 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn3Q07409 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn3Q07409 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn3Q07409 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn3Q07409 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn3Q07409 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.55□□□□□ -0.4
Cntn3Q07409 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn3Q07409 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn3Q07409 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn3Q07409 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn3Q07409 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn3Q07409 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn3Q07409 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn3Q07409 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn3Q07409 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.55□□□□□ -0.4
Cntn3Q07409 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn3Q07409 Gm12196-201ENSMUST00000120954 262 ntBASIC12.55□□□□□ -0.4
Cntn3Q07409 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn3Q07409 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.55□□□□□ -0.4
Cntn3Q07409 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.55□□□□□ -0.4
Cntn3Q07409 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.55□□□□□ -0.4
Cntn3Q07409 Gm8343-201ENSMUST00000182705 994 ntBASIC12.55□□□□□ -0.4
Cntn3Q07409 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.55□□□□□ -0.4
Cntn3Q07409 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.55□□□□□ -0.4
Cntn3Q07409 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.55□□□□□ -0.4
Cntn3Q07409 Gm5369-201ENSMUST00000217499 588 ntBASIC12.55□□□□□ -0.4
Cntn3Q07409 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.55□□□□□ -0.4
Cntn3Q07409 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Cntn3Q07409 Gm21811-201ENSMUST00000096485 930 ntBASIC12.55□□□□□ -0.4
Cntn3Q07409 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn3Q07409 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn3Q07409 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn3Q07409 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn3Q07409 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.55□□□□□ -0.4
Cntn3Q07409 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.55□□□□□ -0.4
Cntn3Q07409 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn3Q07409 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms