Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sox9Q04887 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox9Q04887 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC12.39□□□□□ -0.43
Sox9Q04887 Gm14270-201ENSMUST00000118388 846 ntBASIC12.39□□□□□ -0.43
Sox9Q04887 Gm11502-201ENSMUST00000120917 1211 ntBASIC12.39□□□□□ -0.43
Sox9Q04887 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.39□□□□□ -0.43
Sox9Q04887 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC12.39□□□□□ -0.43
Sox9Q04887 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sox9Q04887 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox9Q04887 Gm4310-201ENSMUST00000177847 889 ntBASIC12.39□□□□□ -0.43
Sox9Q04887 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox9Q04887 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sox9Q04887 Gm19587-201ENSMUST00000191395 545 ntBASIC12.39□□□□□ -0.43
Sox9Q04887 Gm37981-201ENSMUST00000194280 535 ntBASIC12.39□□□□□ -0.43
Sox9Q04887 Gm44315-201ENSMUST00000203041 219 ntBASIC12.39□□□□□ -0.43
Sox9Q04887 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC12.39□□□□□ -0.43
Sox9Q04887 Gm6855-201ENSMUST00000206307 790 ntBASIC12.39□□□□□ -0.43
Sox9Q04887 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sox9Q04887 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC12.39□□□□□ -0.43
Sox9Q04887 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox9Q04887 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox9Q04887 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Sox9Q04887 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox9Q04887 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Sox9Q04887 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.39□□□□□ -0.43
Sox9Q04887 Gm5451-201ENSMUST00000080545 579 ntBASIC12.39□□□□□ -0.43
Sox9Q04887 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox9Q04887 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Sox9Q04887 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox9Q04887 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox9Q04887 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox9Q04887 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.39□□□□□ -0.43
Sox9Q04887 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sox9Q04887 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox9Q04887 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox9Q04887 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.39□□□□□ -0.43
Sox9Q04887 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Sox9Q04887 Paupar-201ENSMUST00000194826 3482 ntBASIC12.39□□□□□ -0.43
Sox9Q04887 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox9Q04887 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox9Q04887 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sox9Q04887 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.38□□□□□ -0.43
Sox9Q04887 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.38□□□□□ -0.43
Sox9Q04887 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox9Q04887 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox9Q04887 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox9Q04887 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sox9Q04887 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox9Q04887 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox9Q04887 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
Sox9Q04887 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox9Q04887 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Sox9Q04887 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox9Q04887 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Sox9Q04887 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Sox9Q04887 Gm23272-201ENSMUST00000104053 129 ntBASIC12.38□□□□□ -0.43
Sox9Q04887 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sox9Q04887 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sox9Q04887 Gm15004-201ENSMUST00000119192 630 ntBASIC12.38□□□□□ -0.43
Sox9Q04887 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC12.38□□□□□ -0.43
Sox9Q04887 Gm7719-201ENSMUST00000182374 975 ntBASIC12.38□□□□□ -0.43
Sox9Q04887 Gm18801-201ENSMUST00000186616 536 ntBASIC12.38□□□□□ -0.43
Sox9Q04887 Gm42816-201ENSMUST00000198433 325 ntBASIC12.38□□□□□ -0.43
Sox9Q04887 Gm6423-201ENSMUST00000204315 934 ntBASIC12.38□□□□□ -0.43
Sox9Q04887 Gm18968-201ENSMUST00000221319 862 ntBASIC12.38□□□□□ -0.43
Sox9Q04887 AC130477.1-201ENSMUST00000226982 420 ntBASIC12.38□□□□□ -0.43
Sox9Q04887 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox9Q04887 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox9Q04887 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Sox9Q04887 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox9Q04887 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox9Q04887 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Sox9Q04887 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox9Q04887 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox9Q04887 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.38□□□□□ -0.43
Sox9Q04887 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC12.38□□□□□ -0.43
Sox9Q04887 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox9Q04887 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.38□□□□□ -0.43
Sox9Q04887 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox9Q04887 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox9Q04887 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox9Q04887 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox9Q04887 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox9Q04887 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sox9Q04887 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.37□□□□□ -0.43
Sox9Q04887 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox9Q04887 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox9Q04887 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox9Q04887 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox9Q04887 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox9Q04887 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox9Q04887 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox9Q04887 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox9Q04887 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox9Q04887 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox9Q04887 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox9Q04887 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox9Q04887 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Sox9Q04887 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.37□□□□□ -0.43
Sox9Q04887 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms