Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43bP86448 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43bP86448 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43bP86448 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43bP86448 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43bP86448 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43bP86448 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.34□□□□□ -0.43
Trim43bP86448 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43bP86448 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43bP86448 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43bP86448 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43bP86448 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Trim43bP86448 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43bP86448 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trim43bP86448 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trim43bP86448 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Trim43bP86448 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trim43bP86448 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trim43bP86448 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trim43bP86448 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43bP86448 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43bP86448 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43bP86448 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trim43bP86448 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43bP86448 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43bP86448 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43bP86448 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43bP86448 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43bP86448 Gm22323-201ENSMUST00000103832 109 ntBASIC12.33□□□□□ -0.44
Trim43bP86448 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.33□□□□□ -0.44
Trim43bP86448 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43bP86448 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43bP86448 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43bP86448 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.33□□□□□ -0.44
Trim43bP86448 Gm9022-201ENSMUST00000182482 992 ntBASIC12.33□□□□□ -0.44
Trim43bP86448 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim43bP86448 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43bP86448 Gm38092-201ENSMUST00000195600 653 ntBASIC12.33□□□□□ -0.44
Trim43bP86448 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim43bP86448 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim43bP86448 Gm45925-201ENSMUST00000218882 744 ntBASIC12.33□□□□□ -0.44
Trim43bP86448 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.33□□□□□ -0.44
Trim43bP86448 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43bP86448 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43bP86448 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43bP86448 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43bP86448 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trim43bP86448 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trim43bP86448 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43bP86448 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43bP86448 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43bP86448 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43bP86448 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trim43bP86448 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43bP86448 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43bP86448 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim43bP86448 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.33□□□□□ -0.44
Trim43bP86448 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43bP86448 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43bP86448 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.33□□□□□ -0.44
Trim43bP86448 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trim43bP86448 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43bP86448 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43bP86448 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43bP86448 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Trim43bP86448 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43bP86448 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43bP86448 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43bP86448 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43bP86448 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim43bP86448 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.32□□□□□ -0.44
Trim43bP86448 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43bP86448 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim43bP86448 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim43bP86448 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43bP86448 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43bP86448 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trim43bP86448 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43bP86448 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trim43bP86448 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43bP86448 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43bP86448 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43bP86448 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43bP86448 Gm12058-201ENSMUST00000118614 437 ntBASIC12.32□□□□□ -0.44
Trim43bP86448 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.32□□□□□ -0.44
Trim43bP86448 Gm13316-201ENSMUST00000140537 691 ntBASIC12.32□□□□□ -0.44
Trim43bP86448 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trim43bP86448 Gm7584-201ENSMUST00000175829 940 ntBASIC12.32□□□□□ -0.44
Trim43bP86448 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Trim43bP86448 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.32□□□□□ -0.44
Trim43bP86448 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Trim43bP86448 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43bP86448 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43bP86448 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43bP86448 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43bP86448 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Trim43bP86448 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43bP86448 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trim43bP86448 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43bP86448 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms