Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Atf1P81269 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Atf1P81269 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Atf1P81269 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Atf1P81269 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Atf1P81269 Gm45011-201ENSMUST00000207620 2297 ntBASIC10.36□□□□□ -0.75
Atf1P81269 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Atf1P81269 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Atf1P81269 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Atf1P81269 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Atf1P81269 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Atf1P81269 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Atf1P81269 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Atf1P81269 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Atf1P81269 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Atf1P81269 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Atf1P81269 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Atf1P81269 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Atf1P81269 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Atf1P81269 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Atf1P81269 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Atf1P81269 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Atf1P81269 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Atf1P81269 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Atf1P81269 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Atf1P81269 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Atf1P81269 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Atf1P81269 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Atf1P81269 Gm12742-201ENSMUST00000117326 410 ntBASIC10.35□□□□□ -0.75
Atf1P81269 Gm12164-201ENSMUST00000121695 551 ntBASIC10.35□□□□□ -0.75
Atf1P81269 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC10.35□□□□□ -0.75
Atf1P81269 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC10.35□□□□□ -0.75
Atf1P81269 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC10.35□□□□□ -0.75
Atf1P81269 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.35□□□□□ -0.75
Atf1P81269 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.35□□□□□ -0.75
Atf1P81269 Gm18935-201ENSMUST00000212692 664 ntBASIC10.35□□□□□ -0.75
Atf1P81269 AC132384.14-201ENSMUST00000219346 1147 ntBASIC10.35□□□□□ -0.75
Atf1P81269 Gm8712-201ENSMUST00000221090 701 ntBASIC10.35□□□□□ -0.75
Atf1P81269 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Atf1P81269 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.35□□□□□ -0.75
Atf1P81269 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Atf1P81269 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Atf1P81269 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Atf1P81269 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Atf1P81269 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Atf1P81269 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Atf1P81269 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Atf1P81269 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Atf1P81269 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Atf1P81269 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Atf1P81269 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Atf1P81269 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Atf1P81269 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Atf1P81269 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Atf1P81269 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Atf1P81269 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Atf1P81269 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Atf1P81269 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Atf1P81269 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.34□□□□□ -0.75
Atf1P81269 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Atf1P81269 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Atf1P81269 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Atf1P81269 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Atf1P81269 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.34□□□□□ -0.75
Atf1P81269 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Atf1P81269 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Atf1P81269 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Atf1P81269 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.34□□□□□ -0.75
Atf1P81269 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Atf1P81269 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC10.34□□□□□ -0.75
Atf1P81269 Gm14644-201ENSMUST00000116671 647 ntBASIC10.34□□□□□ -0.75
Atf1P81269 Gm5419-201ENSMUST00000119301 527 ntBASIC10.34□□□□□ -0.75
Atf1P81269 Gm15547-201ENSMUST00000122152 333 ntBASIC10.34□□□□□ -0.75
Atf1P81269 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Atf1P81269 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC10.34□□□□□ -0.75
Atf1P81269 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Atf1P81269 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Atf1P81269 Gm17420-201ENSMUST00000164753 153 ntBASIC10.34□□□□□ -0.75
Atf1P81269 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Atf1P81269 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
Atf1P81269 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.34□□□□□ -0.75
Atf1P81269 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Atf1P81269 Gm9230-201ENSMUST00000188228 532 ntBASIC10.34□□□□□ -0.75
Atf1P81269 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Atf1P81269 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Atf1P81269 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Atf1P81269 Gm30285-201ENSMUST00000214614 422 ntBASIC10.34□□□□□ -0.75
Atf1P81269 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC10.34□□□□□ -0.75
Atf1P81269 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.34□□□□□ -0.75
Atf1P81269 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Atf1P81269 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Atf1P81269 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Atf1P81269 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Atf1P81269 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Atf1P81269 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Atf1P81269 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Atf1P81269 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Atf1P81269 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Atf1P81269 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.34□□□□□ -0.75
Atf1P81269 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 118 ms