Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CiitaP79621 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
CiitaP79621 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CiitaP79621 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CiitaP79621 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CiitaP79621 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.96□□□□□ -0.34
CiitaP79621 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
CiitaP79621 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CiitaP79621 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
CiitaP79621 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CiitaP79621 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CiitaP79621 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
CiitaP79621 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CiitaP79621 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CiitaP79621 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
CiitaP79621 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CiitaP79621 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CiitaP79621 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CiitaP79621 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CiitaP79621 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CiitaP79621 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CiitaP79621 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CiitaP79621 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CiitaP79621 Gm12579-201ENSMUST00000118040 783 ntBASIC12.95□□□□□ -0.34
CiitaP79621 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CiitaP79621 Gm5523-201ENSMUST00000180415 997 ntBASIC12.95□□□□□ -0.34
CiitaP79621 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CiitaP79621 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CiitaP79621 Gm6450-201ENSMUST00000200896 574 ntBASIC12.95□□□□□ -0.34
CiitaP79621 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.95□□□□□ -0.34
CiitaP79621 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.95□□□□□ -0.34
CiitaP79621 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.95□□□□□ -0.34
CiitaP79621 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CiitaP79621 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CiitaP79621 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CiitaP79621 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CiitaP79621 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CiitaP79621 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CiitaP79621 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CiitaP79621 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CiitaP79621 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CiitaP79621 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CiitaP79621 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CiitaP79621 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
CiitaP79621 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CiitaP79621 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CiitaP79621 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
CiitaP79621 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CiitaP79621 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CiitaP79621 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CiitaP79621 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CiitaP79621 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CiitaP79621 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CiitaP79621 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.94□□□□□ -0.34
CiitaP79621 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CiitaP79621 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CiitaP79621 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CiitaP79621 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CiitaP79621 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
CiitaP79621 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CiitaP79621 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CiitaP79621 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CiitaP79621 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CiitaP79621 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.94□□□□□ -0.34
CiitaP79621 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.94□□□□□ -0.34
CiitaP79621 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.94□□□□□ -0.34
CiitaP79621 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CiitaP79621 Mir7686-201ENSMUST00000200604 57 ntBASIC12.94□□□□□ -0.34
CiitaP79621 Gm45118-201ENSMUST00000208928 825 ntBASIC12.94□□□□□ -0.34
CiitaP79621 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.94□□□□□ -0.34
CiitaP79621 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CiitaP79621 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CiitaP79621 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.94□□□□□ -0.34
CiitaP79621 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CiitaP79621 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CiitaP79621 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CiitaP79621 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CiitaP79621 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CiitaP79621 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CiitaP79621 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CiitaP79621 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CiitaP79621 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CiitaP79621 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CiitaP79621 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CiitaP79621 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CiitaP79621 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CiitaP79621 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CiitaP79621 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.93□□□□□ -0.34
CiitaP79621 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CiitaP79621 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CiitaP79621 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CiitaP79621 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.93□□□□□ -0.34
CiitaP79621 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CiitaP79621 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CiitaP79621 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CiitaP79621 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CiitaP79621 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CiitaP79621 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CiitaP79621 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CiitaP79621 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms