Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC19.23■□□□□ 0.67
Cux2P70298 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Cux2P70298 Gm42660-201ENSMUST00000197733 947 ntBASIC19.23■□□□□ 0.67
Cux2P70298 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Cux2P70298 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Cux2P70298 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cux2P70298 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC19.23■□□□□ 0.67
Cux2P70298 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cux2P70298 Gm10580-201ENSMUST00000097985 396 ntBASIC19.23■□□□□ 0.67
Cux2P70298 Gm10582-201ENSMUST00000097987 396 ntBASIC19.23■□□□□ 0.67
Cux2P70298 Gm10583-201ENSMUST00000097988 396 ntBASIC19.23■□□□□ 0.67
Cux2P70298 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cux2P70298 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cux2P70298 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cux2P70298 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cux2P70298 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cux2P70298 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cux2P70298 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cux2P70298 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Cux2P70298 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cux2P70298 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cux2P70298 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
Cux2P70298 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cux2P70298 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cux2P70298 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC19.22■□□□□ 0.67
Cux2P70298 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC19.22■□□□□ 0.67
Cux2P70298 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cux2P70298 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cux2P70298 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cux2P70298 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cux2P70298 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cux2P70298 Gm8152-201ENSMUST00000120842 637 ntBASIC19.22■□□□□ 0.67
Cux2P70298 Gm25343-201ENSMUST00000157460 107 ntBASIC19.22■□□□□ 0.67
Cux2P70298 Gm26313-201ENSMUST00000157770 308 ntBASIC19.22■□□□□ 0.67
Cux2P70298 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC19.22■□□□□ 0.67
Cux2P70298 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC19.22■□□□□ 0.67
Cux2P70298 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC19.22■□□□□ 0.67
Cux2P70298 Gm42751-201ENSMUST00000198065 559 ntBASIC19.22■□□□□ 0.67
Cux2P70298 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC19.22■□□□□ 0.67
Cux2P70298 Gm5178-201ENSMUST00000219380 898 ntBASIC19.22■□□□□ 0.67
Cux2P70298 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cux2P70298 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Cux2P70298 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Cux2P70298 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cux2P70298 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Cux2P70298 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cux2P70298 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC19.22■□□□□ 0.67
Cux2P70298 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cux2P70298 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cux2P70298 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cux2P70298 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cux2P70298 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cux2P70298 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC19.21■□□□□ 0.67
Cux2P70298 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cux2P70298 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Cux2P70298 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cux2P70298 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cux2P70298 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cux2P70298 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
Cux2P70298 Gm23439-201ENSMUST00000104292 132 ntBASIC19.21■□□□□ 0.67
Cux2P70298 Gm24294-201ENSMUST00000158295 277 ntBASIC19.21■□□□□ 0.67
Cux2P70298 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cux2P70298 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC19.21■□□□□ 0.67
Cux2P70298 Gm6518-201ENSMUST00000208450 342 ntBASIC19.21■□□□□ 0.67
Cux2P70298 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cux2P70298 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cux2P70298 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Cux2P70298 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cux2P70298 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cux2P70298 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cux2P70298 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cux2P70298 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cux2P70298 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cux2P70298 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cux2P70298 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cux2P70298 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Cux2P70298 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cux2P70298 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Cux2P70298 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cux2P70298 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC19.2■□□□□ 0.66
Cux2P70298 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cux2P70298 Kcnk16-202ENSMUST00000225596 2127 ntBASIC19.2■□□□□ 0.66
Cux2P70298 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cux2P70298 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Cux2P70298 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cux2P70298 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC19.2■□□□□ 0.66
Cux2P70298 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cux2P70298 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Cux2P70298 Gm43244-201ENSMUST00000196994 1285 ntBASIC19.2■□□□□ 0.66
Cux2P70298 AC121567.1-201ENSMUST00000227213 842 ntBASIC19.2■□□□□ 0.66
Cux2P70298 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Cux2P70298 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cux2P70298 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Cux2P70298 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cux2P70298 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cux2P70298 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cux2P70298 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cux2P70298 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cux2P70298 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC19.2■□□□□ 0.66
Cux2P70298 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms