Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.27□□□□□ -0.45
Ybx1P62960 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC12.27□□□□□ -0.45
Ybx1P62960 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.27□□□□□ -0.45
Ybx1P62960 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Ybx1P62960 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ybx1P62960 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Ybx1P62960 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ybx1P62960 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ybx1P62960 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Ybx1P62960 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.27□□□□□ -0.45
Ybx1P62960 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.27□□□□□ -0.45
Ybx1P62960 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.27□□□□□ -0.45
Ybx1P62960 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.27□□□□□ -0.45
Ybx1P62960 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ybx1P62960 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ybx1P62960 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Ybx1P62960 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ybx1P62960 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Ybx1P62960 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ybx1P62960 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ybx1P62960 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ybx1P62960 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ybx1P62960 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Ybx1P62960 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ybx1P62960 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ybx1P62960 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.26□□□□□ -0.45
Ybx1P62960 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ybx1P62960 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ybx1P62960 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Ybx1P62960 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ybx1P62960 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.26□□□□□ -0.45
Ybx1P62960 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ybx1P62960 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ybx1P62960 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ybx1P62960 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ybx1P62960 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Ybx1P62960 Gm22920-201ENSMUST00000102175 109 ntBASIC12.26□□□□□ -0.45
Ybx1P62960 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.26□□□□□ -0.45
Ybx1P62960 Gm11660-201ENSMUST00000120955 412 ntBASIC12.26□□□□□ -0.45
Ybx1P62960 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC12.26□□□□□ -0.45
Ybx1P62960 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ybx1P62960 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.26□□□□□ -0.45
Ybx1P62960 Gm8815-201ENSMUST00000173809 620 ntBASIC12.26□□□□□ -0.45
Ybx1P62960 Gm18367-201ENSMUST00000176139 600 ntBASIC12.26□□□□□ -0.45
Ybx1P62960 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ybx1P62960 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ybx1P62960 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.26□□□□□ -0.45
Ybx1P62960 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ybx1P62960 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC12.26□□□□□ -0.45
Ybx1P62960 Gm6867-201ENSMUST00000219165 425 ntBASIC12.26□□□□□ -0.45
Ybx1P62960 CT025551.1-201ENSMUST00000223996 692 ntBASIC12.26□□□□□ -0.45
Ybx1P62960 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ybx1P62960 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ybx1P62960 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ybx1P62960 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ybx1P62960 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.26□□□□□ -0.45
Ybx1P62960 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.26□□□□□ -0.45
Ybx1P62960 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Ybx1P62960 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ybx1P62960 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ybx1P62960 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ybx1P62960 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ybx1P62960 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ybx1P62960 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Ybx1P62960 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ybx1P62960 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ybx1P62960 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ybx1P62960 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ybx1P62960 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ybx1P62960 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.25□□□□□ -0.45
Ybx1P62960 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ybx1P62960 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ybx1P62960 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ybx1P62960 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ybx1P62960 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ybx1P62960 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.25□□□□□ -0.45
Ybx1P62960 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ybx1P62960 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ybx1P62960 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ybx1P62960 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ybx1P62960 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.25□□□□□ -0.45
Ybx1P62960 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.25□□□□□ -0.45
Ybx1P62960 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ybx1P62960 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ybx1P62960 Gm14193-201ENSMUST00000105067 153 ntBASIC12.25□□□□□ -0.45
Ybx1P62960 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ybx1P62960 Gm4993-201ENSMUST00000118719 1174 ntBASIC12.25□□□□□ -0.45
Ybx1P62960 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.25□□□□□ -0.45
Ybx1P62960 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.25□□□□□ -0.45
Ybx1P62960 Gm6485-201ENSMUST00000160676 439 ntBASIC12.25□□□□□ -0.45
Ybx1P62960 Gm23153-201ENSMUST00000175323 313 ntBASIC12.25□□□□□ -0.45
Ybx1P62960 Gm8492-201ENSMUST00000182375 987 ntBASIC12.25□□□□□ -0.45
Ybx1P62960 Gm28388-201ENSMUST00000186262 437 ntBASIC12.25□□□□□ -0.45
Ybx1P62960 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ybx1P62960 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ybx1P62960 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC12.25□□□□□ -0.45
Ybx1P62960 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC12.25□□□□□ -0.45
Ybx1P62960 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.25□□□□□ -0.45
Ybx1P62960 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.25□□□□□ -0.45
Ybx1P62960 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms