Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lim2P56563 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lim2P56563 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lim2P56563 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lim2P56563 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.97□□□□□ -0.49
Lim2P56563 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lim2P56563 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lim2P56563 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lim2P56563 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lim2P56563 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lim2P56563 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lim2P56563 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lim2P56563 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lim2P56563 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Lim2P56563 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lim2P56563 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lim2P56563 Gm14028-201ENSMUST00000117434 479 ntBASIC11.97□□□□□ -0.49
Lim2P56563 Gm12036-201ENSMUST00000120008 530 ntBASIC11.97□□□□□ -0.49
Lim2P56563 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.97□□□□□ -0.49
Lim2P56563 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.97□□□□□ -0.49
Lim2P56563 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.97□□□□□ -0.49
Lim2P56563 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.97□□□□□ -0.49
Lim2P56563 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lim2P56563 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lim2P56563 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lim2P56563 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lim2P56563 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lim2P56563 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.97□□□□□ -0.49
Lim2P56563 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Lim2P56563 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lim2P56563 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lim2P56563 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lim2P56563 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lim2P56563 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lim2P56563 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lim2P56563 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Lim2P56563 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lim2P56563 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lim2P56563 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.96□□□□□ -0.49
Lim2P56563 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lim2P56563 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lim2P56563 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lim2P56563 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Lim2P56563 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lim2P56563 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lim2P56563 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lim2P56563 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lim2P56563 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lim2P56563 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lim2P56563 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Lim2P56563 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lim2P56563 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.96□□□□□ -0.49
Lim2P56563 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lim2P56563 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lim2P56563 Gm22133-201ENSMUST00000102082 109 ntBASIC11.96□□□□□ -0.49
Lim2P56563 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lim2P56563 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lim2P56563 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lim2P56563 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.96□□□□□ -0.49
Lim2P56563 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.96□□□□□ -0.49
Lim2P56563 Gm4607-201ENSMUST00000206649 577 ntBASIC11.96□□□□□ -0.49
Lim2P56563 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lim2P56563 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lim2P56563 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lim2P56563 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Lim2P56563 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lim2P56563 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Lim2P56563 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lim2P56563 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lim2P56563 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lim2P56563 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Lim2P56563 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lim2P56563 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lim2P56563 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lim2P56563 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Lim2P56563 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lim2P56563 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Lim2P56563 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Lim2P56563 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lim2P56563 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Lim2P56563 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Lim2P56563 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Lim2P56563 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Lim2P56563 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Lim2P56563 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lim2P56563 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lim2P56563 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Lim2P56563 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lim2P56563 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lim2P56563 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lim2P56563 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lim2P56563 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lim2P56563 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lim2P56563 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lim2P56563 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Lim2P56563 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Lim2P56563 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Lim2P56563 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Lim2P56563 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lim2P56563 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms