Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.37□□□□□ -0.59
RoraP51448 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.37□□□□□ -0.59
RoraP51448 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.37□□□□□ -0.59
RoraP51448 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RoraP51448 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.37□□□□□ -0.59
RoraP51448 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RoraP51448 Gm43184-201ENSMUST00000197247 542 ntBASIC11.37□□□□□ -0.59
RoraP51448 Gm9555-201ENSMUST00000200908 583 ntBASIC11.37□□□□□ -0.59
RoraP51448 Gm4607-201ENSMUST00000206649 577 ntBASIC11.37□□□□□ -0.59
RoraP51448 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
RoraP51448 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
RoraP51448 Gm21811-201ENSMUST00000096485 930 ntBASIC11.37□□□□□ -0.59
RoraP51448 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
RoraP51448 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RoraP51448 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
RoraP51448 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
RoraP51448 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.37□□□□□ -0.59
RoraP51448 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.37□□□□□ -0.59
RoraP51448 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RoraP51448 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RoraP51448 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
RoraP51448 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RoraP51448 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RoraP51448 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RoraP51448 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RoraP51448 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RoraP51448 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RoraP51448 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RoraP51448 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.36□□□□□ -0.59
RoraP51448 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
RoraP51448 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RoraP51448 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
RoraP51448 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RoraP51448 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RoraP51448 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RoraP51448 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RoraP51448 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
RoraP51448 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RoraP51448 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RoraP51448 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RoraP51448 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RoraP51448 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.36□□□□□ -0.59
RoraP51448 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.36□□□□□ -0.59
RoraP51448 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RoraP51448 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RoraP51448 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RoraP51448 Gm26286-201ENSMUST00000104166 134 ntBASIC11.36□□□□□ -0.59
RoraP51448 Gm14058-201ENSMUST00000116082 735 ntBASIC11.36□□□□□ -0.59
RoraP51448 Gm11511-201ENSMUST00000118146 540 ntBASIC11.36□□□□□ -0.59
RoraP51448 Gm11941-201ENSMUST00000119904 610 ntBASIC11.36□□□□□ -0.59
RoraP51448 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.36□□□□□ -0.59
RoraP51448 Gm12196-201ENSMUST00000120954 262 ntBASIC11.36□□□□□ -0.59
RoraP51448 n-R5s14-201ENSMUST00000122688 107 ntBASIC11.36□□□□□ -0.59
RoraP51448 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.36□□□□□ -0.59
RoraP51448 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RoraP51448 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.36□□□□□ -0.59
RoraP51448 Gm5523-201ENSMUST00000180415 997 ntBASIC11.36□□□□□ -0.59
RoraP51448 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RoraP51448 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.36□□□□□ -0.59
RoraP51448 Gm4034-201ENSMUST00000187674 480 ntBASIC11.36□□□□□ -0.59
RoraP51448 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
RoraP51448 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RoraP51448 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.36□□□□□ -0.59
RoraP51448 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RoraP51448 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RoraP51448 Gm26448-201ENSMUST00000082446 203 ntBASIC11.36□□□□□ -0.59
RoraP51448 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
RoraP51448 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
RoraP51448 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RoraP51448 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
RoraP51448 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RoraP51448 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RoraP51448 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
RoraP51448 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.36□□□□□ -0.59
RoraP51448 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
RoraP51448 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
RoraP51448 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
RoraP51448 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
RoraP51448 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
RoraP51448 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RoraP51448 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.36□□□□□ -0.59
RoraP51448 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.35□□□□□ -0.59
RoraP51448 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RoraP51448 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
RoraP51448 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RoraP51448 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
RoraP51448 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
RoraP51448 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
RoraP51448 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RoraP51448 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RoraP51448 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
RoraP51448 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
RoraP51448 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
RoraP51448 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.35□□□□□ -0.59
RoraP51448 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.35□□□□□ -0.59
RoraP51448 Gm13045-201ENSMUST00000119019 712 ntBASIC11.35□□□□□ -0.59
RoraP51448 Gm12501-201ENSMUST00000119163 529 ntBASIC11.35□□□□□ -0.59
RoraP51448 Gm14247-201ENSMUST00000120950 237 ntBASIC11.35□□□□□ -0.59
RoraP51448 Gm12164-201ENSMUST00000121695 551 ntBASIC11.35□□□□□ -0.59
RoraP51448 Gm25881-201ENSMUST00000157783 103 ntBASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms