Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 Gm3433-201ENSMUST00000210149 1058 ntBASIC13.48□□□□□ -0.25
Atoh1P48985 Gm30671-201ENSMUST00000214898 318 ntBASIC13.48□□□□□ -0.25
Atoh1P48985 Gm6390-201ENSMUST00000215034 589 ntBASIC13.48□□□□□ -0.25
Atoh1P48985 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Atoh1P48985 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.48□□□□□ -0.25
Atoh1P48985 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.48□□□□□ -0.25
Atoh1P48985 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Atoh1P48985 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Atoh1P48985 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Atoh1P48985 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Atoh1P48985 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Atoh1P48985 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Atoh1P48985 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Atoh1P48985 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Atoh1P48985 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.47□□□□□ -0.25
Atoh1P48985 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Atoh1P48985 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Atoh1P48985 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Atoh1P48985 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Atoh1P48985 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Atoh1P48985 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Atoh1P48985 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Atoh1P48985 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.47□□□□□ -0.25
Atoh1P48985 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Atoh1P48985 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Atoh1P48985 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.47□□□□□ -0.25
Atoh1P48985 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.47□□□□□ -0.25
Atoh1P48985 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Atoh1P48985 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Atoh1P48985 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Atoh1P48985 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.47□□□□□ -0.25
Atoh1P48985 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Atoh1P48985 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC13.47□□□□□ -0.25
Atoh1P48985 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Atoh1P48985 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Atoh1P48985 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC13.47□□□□□ -0.25
Atoh1P48985 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Atoh1P48985 Gm7741-201ENSMUST00000181445 989 ntBASIC13.47□□□□□ -0.25
Atoh1P48985 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC13.47□□□□□ -0.25
Atoh1P48985 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC13.47□□□□□ -0.25
Atoh1P48985 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC13.47□□□□□ -0.25
Atoh1P48985 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Atoh1P48985 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Atoh1P48985 Gm43380-201ENSMUST00000200421 220 ntBASIC13.47□□□□□ -0.25
Atoh1P48985 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Atoh1P48985 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC13.47□□□□□ -0.25
Atoh1P48985 Gm45856-201ENSMUST00000212752 416 ntBASIC13.47□□□□□ -0.25
Atoh1P48985 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC13.47□□□□□ -0.25
Atoh1P48985 Gm18499-201ENSMUST00000220808 1021 ntBASIC13.47□□□□□ -0.25
Atoh1P48985 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
Atoh1P48985 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC13.47□□□□□ -0.25
Atoh1P48985 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Atoh1P48985 Gm10263-201ENSMUST00000085163 300 ntBASIC13.47□□□□□ -0.25
Atoh1P48985 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Atoh1P48985 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.47□□□□□ -0.25
Atoh1P48985 AC130823.1-201ENSMUST00000228929 1549 ntBASIC13.47□□□□□ -0.25
Atoh1P48985 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Atoh1P48985 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Atoh1P48985 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Atoh1P48985 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Atoh1P48985 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Atoh1P48985 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Atoh1P48985 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Atoh1P48985 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Atoh1P48985 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Atoh1P48985 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Atoh1P48985 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Atoh1P48985 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Atoh1P48985 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Atoh1P48985 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.46□□□□□ -0.25
Atoh1P48985 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Atoh1P48985 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Atoh1P48985 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC13.46□□□□□ -0.25
Atoh1P48985 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Atoh1P48985 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Atoh1P48985 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Atoh1P48985 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Atoh1P48985 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Atoh1P48985 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Atoh1P48985 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC13.46□□□□□ -0.25
Atoh1P48985 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Atoh1P48985 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Atoh1P48985 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Atoh1P48985 Gm37638-201ENSMUST00000194337 1123 ntBASIC13.46□□□□□ -0.25
Atoh1P48985 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Atoh1P48985 Gm45592-201ENSMUST00000209605 1043 ntBASIC13.46□□□□□ -0.25
Atoh1P48985 Gm7082-201ENSMUST00000209880 969 ntBASIC13.46□□□□□ -0.25
Atoh1P48985 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC13.46□□□□□ -0.25
Atoh1P48985 AC118639.2-201ENSMUST00000226289 223 ntBASIC13.46□□□□□ -0.25
Atoh1P48985 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Atoh1P48985 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Atoh1P48985 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Atoh1P48985 Gm8894-201ENSMUST00000074642 666 ntBASIC13.46□□□□□ -0.25
Atoh1P48985 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Atoh1P48985 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.46□□□□□ -0.26
Atoh1P48985 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Atoh1P48985 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Atoh1P48985 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.26
Atoh1P48985 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Atoh1P48985 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms