Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-6P43688 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-6P43688 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-6P43688 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.34□□□□□ -0.59
Nkx2-6P43688 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.34□□□□□ -0.59
Nkx2-6P43688 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.34□□□□□ -0.59
Nkx2-6P43688 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-6P43688 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-6P43688 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.34□□□□□ -0.59
Nkx2-6P43688 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-6P43688 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-6P43688 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-6P43688 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Nkx2-6P43688 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-6P43688 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Nkx2-6P43688 Gm11660-201ENSMUST00000120955 412 ntBASIC11.34□□□□□ -0.59
Nkx2-6P43688 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.34□□□□□ -0.59
Nkx2-6P43688 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.34□□□□□ -0.59
Nkx2-6P43688 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-6P43688 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Nkx2-6P43688 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Nkx2-6P43688 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Nkx2-6P43688 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.34□□□□□ -0.59
Nkx2-6P43688 Gm8285-201ENSMUST00000208293 759 ntBASIC11.34□□□□□ -0.59
Nkx2-6P43688 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.34□□□□□ -0.59
Nkx2-6P43688 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.34□□□□□ -0.59
Nkx2-6P43688 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-6P43688 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-6P43688 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-6P43688 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Nkx2-6P43688 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.34□□□□□ -0.59
Nkx2-6P43688 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-6P43688 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Nkx2-6P43688 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-6P43688 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-6P43688 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-6P43688 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Nkx2-6P43688 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-6P43688 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-6P43688 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-6P43688 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.34□□□□□ -0.59
Nkx2-6P43688 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.34□□□□□ -0.59
Nkx2-6P43688 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-6P43688 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.34□□□□□ -0.59
Nkx2-6P43688 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Nkx2-6P43688 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx2-6P43688 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx2-6P43688 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Nkx2-6P43688 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx2-6P43688 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx2-6P43688 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx2-6P43688 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx2-6P43688 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Nkx2-6P43688 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.33□□□□□ -0.6
Nkx2-6P43688 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Nkx2-6P43688 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Nkx2-6P43688 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx2-6P43688 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx2-6P43688 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx2-6P43688 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx2-6P43688 Gm13263-201ENSMUST00000121271 838 ntBASIC11.33□□□□□ -0.6
Nkx2-6P43688 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.33□□□□□ -0.6
Nkx2-6P43688 Gm10051-201ENSMUST00000145209 414 ntBASIC11.33□□□□□ -0.6
Nkx2-6P43688 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.33□□□□□ -0.6
Nkx2-6P43688 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx2-6P43688 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.33□□□□□ -0.6
Nkx2-6P43688 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Nkx2-6P43688 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.33□□□□□ -0.6
Nkx2-6P43688 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.33□□□□□ -0.6
Nkx2-6P43688 Mir7686-201ENSMUST00000200604 57 ntBASIC11.33□□□□□ -0.6
Nkx2-6P43688 Gm44545-201ENSMUST00000208262 746 ntBASIC11.33□□□□□ -0.6
Nkx2-6P43688 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Nkx2-6P43688 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.33□□□□□ -0.6
Nkx2-6P43688 D9Wsu149-201ENSMUST00000214169 594 ntBASIC11.33□□□□□ -0.6
Nkx2-6P43688 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.33□□□□□ -0.6
Nkx2-6P43688 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx2-6P43688 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx2-6P43688 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.33□□□□□ -0.6
Nkx2-6P43688 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx2-6P43688 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx2-6P43688 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx2-6P43688 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.33□□□□□ -0.6
Nkx2-6P43688 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx2-6P43688 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Nkx2-6P43688 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx2-6P43688 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx2-6P43688 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx2-6P43688 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx2-6P43688 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx2-6P43688 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.32□□□□□ -0.6
Nkx2-6P43688 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-6P43688 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.32□□□□□ -0.6
Nkx2-6P43688 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Nkx2-6P43688 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Nkx2-6P43688 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-6P43688 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-6P43688 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-6P43688 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-6P43688 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-6P43688 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms