Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox18P43680 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Sox18P43680 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox18P43680 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox18P43680 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.7□□□□□ -0.54
Sox18P43680 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox18P43680 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox18P43680 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox18P43680 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Sox18P43680 Gm12073-201ENSMUST00000117382 524 ntBASIC11.7□□□□□ -0.54
Sox18P43680 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.7□□□□□ -0.54
Sox18P43680 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox18P43680 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sox18P43680 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sox18P43680 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Sox18P43680 Gm44980-201ENSMUST00000205826 314 ntBASIC11.7□□□□□ -0.54
Sox18P43680 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Sox18P43680 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC11.7□□□□□ -0.54
Sox18P43680 Gm9139-201ENSMUST00000218817 700 ntBASIC11.7□□□□□ -0.54
Sox18P43680 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sox18P43680 AC154424.1-201ENSMUST00000225883 799 ntBASIC11.7□□□□□ -0.54
Sox18P43680 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
Sox18P43680 n-R5s211-201ENSMUST00000093689 119 ntBASIC11.7□□□□□ -0.54
Sox18P43680 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sox18P43680 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox18P43680 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sox18P43680 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Sox18P43680 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox18P43680 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sox18P43680 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox18P43680 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox18P43680 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.7□□□□□ -0.54
Sox18P43680 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox18P43680 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox18P43680 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
Sox18P43680 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sox18P43680 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox18P43680 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Sox18P43680 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Sox18P43680 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox18P43680 AC154186.1-201ENSMUST00000227711 1597 ntBASIC11.7□□□□□ -0.54
Sox18P43680 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sox18P43680 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox18P43680 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox18P43680 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox18P43680 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox18P43680 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Sox18P43680 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox18P43680 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox18P43680 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox18P43680 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox18P43680 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Sox18P43680 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox18P43680 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.69□□□□□ -0.54
Sox18P43680 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox18P43680 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Sox18P43680 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sox18P43680 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.69□□□□□ -0.54
Sox18P43680 Mir706-201ENSMUST00000102262 84 ntBASIC11.69□□□□□ -0.54
Sox18P43680 Tcrg-V1-201ENSMUST00000103564 374 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Sox18P43680 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sox18P43680 Gm11956-201ENSMUST00000119525 512 ntBASIC11.69□□□□□ -0.54
Sox18P43680 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox18P43680 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.69□□□□□ -0.54
Sox18P43680 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.69□□□□□ -0.54
Sox18P43680 Gm25843-201ENSMUST00000122582 314 ntBASIC11.69□□□□□ -0.54
Sox18P43680 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sox18P43680 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.69□□□□□ -0.54
Sox18P43680 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sox18P43680 Gm37299-201ENSMUST00000193951 826 ntBASIC11.69□□□□□ -0.54
Sox18P43680 Gm44582-201ENSMUST00000209125 445 ntBASIC11.69□□□□□ -0.54
Sox18P43680 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sox18P43680 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.69□□□□□ -0.54
Sox18P43680 AC140368.1-202ENSMUST00000226131 658 ntBASIC11.69□□□□□ -0.54
Sox18P43680 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Sox18P43680 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox18P43680 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sox18P43680 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox18P43680 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox18P43680 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Sox18P43680 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Sox18P43680 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sox18P43680 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox18P43680 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox18P43680 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sox18P43680 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox18P43680 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox18P43680 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Sox18P43680 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox18P43680 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox18P43680 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox18P43680 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox18P43680 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Sox18P43680 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sox18P43680 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox18P43680 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox18P43680 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox18P43680 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Sox18P43680 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox18P43680 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms