Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-2P42586 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.97□□□□□ -0.65
Nkx2-2P42586 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx2-2P42586 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-2P42586 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.96□□□□□ -0.65
Nkx2-2P42586 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-2P42586 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-2P42586 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-2P42586 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-2P42586 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-2P42586 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC10.96□□□□□ -0.65
Nkx2-2P42586 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.96□□□□□ -0.65
Nkx2-2P42586 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-2P42586 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-2P42586 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-2P42586 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-2P42586 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-2P42586 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-2P42586 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-2P42586 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Nkx2-2P42586 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-2P42586 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.96□□□□□ -0.65
Nkx2-2P42586 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-2P42586 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.96□□□□□ -0.65
Nkx2-2P42586 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx2-2P42586 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC10.96□□□□□ -0.65
Nkx2-2P42586 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC10.96□□□□□ -0.65
Nkx2-2P42586 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.96□□□□□ -0.65
Nkx2-2P42586 Gm4157-201ENSMUST00000211647 679 ntBASIC10.96□□□□□ -0.65
Nkx2-2P42586 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx2-2P42586 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx2-2P42586 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx2-2P42586 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx2-2P42586 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx2-2P42586 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx2-2P42586 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.66
Nkx2-2P42586 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.96□□□□□ -0.66
Nkx2-2P42586 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
Nkx2-2P42586 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx2-2P42586 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.96□□□□□ -0.66
Nkx2-2P42586 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx2-2P42586 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx2-2P42586 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx2-2P42586 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx2-2P42586 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx2-2P42586 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.96□□□□□ -0.66
Nkx2-2P42586 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Nkx2-2P42586 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-2P42586 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.95□□□□□ -0.66
Nkx2-2P42586 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Nkx2-2P42586 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-2P42586 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-2P42586 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-2P42586 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-2P42586 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.95□□□□□ -0.66
Nkx2-2P42586 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-2P42586 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-2P42586 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-2P42586 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC10.95□□□□□ -0.66
Nkx2-2P42586 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-2P42586 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-2P42586 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-2P42586 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-2P42586 Crry-ps-201ENSMUST00000079090 1309 ntBASIC10.95□□□□□ -0.66
Nkx2-2P42586 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-2P42586 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Nkx2-2P42586 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Nkx2-2P42586 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Nkx2-2P42586 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-2P42586 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-2P42586 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-2P42586 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-2P42586 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-2P42586 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC10.95□□□□□ -0.66
Nkx2-2P42586 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-2P42586 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Nkx2-2P42586 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC10.95□□□□□ -0.66
Nkx2-2P42586 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Nkx2-2P42586 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC10.95□□□□□ -0.66
Nkx2-2P42586 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC10.95□□□□□ -0.66
Nkx2-2P42586 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC10.95□□□□□ -0.66
Nkx2-2P42586 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-2P42586 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-2P42586 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-2P42586 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-2P42586 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-2P42586 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-2P42586 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-2P42586 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-2P42586 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Nkx2-2P42586 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Nkx2-2P42586 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-2P42586 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-2P42586 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-2P42586 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-2P42586 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx2-2P42586 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Nkx2-2P42586 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
Nkx2-2P42586 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkx2-2P42586 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms