Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.95□□□□□ -0.5
Nckap1P28660 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Nckap1P28660 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Nckap1P28660 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.94□□□□□ -0.5
Nckap1P28660 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Nckap1P28660 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Nckap1P28660 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nckap1P28660 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nckap1P28660 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nckap1P28660 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nckap1P28660 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nckap1P28660 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nckap1P28660 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nckap1P28660 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Nckap1P28660 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Nckap1P28660 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nckap1P28660 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nckap1P28660 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nckap1P28660 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.94□□□□□ -0.5
Nckap1P28660 Gm8199-201ENSMUST00000121323 823 ntBASIC11.94□□□□□ -0.5
Nckap1P28660 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nckap1P28660 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.94□□□□□ -0.5
Nckap1P28660 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.94□□□□□ -0.5
Nckap1P28660 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.94□□□□□ -0.5
Nckap1P28660 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nckap1P28660 AC122876.1-201ENSMUST00000217619 825 ntBASIC11.94□□□□□ -0.5
Nckap1P28660 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.94□□□□□ -0.5
Nckap1P28660 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.94□□□□□ -0.5
Nckap1P28660 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nckap1P28660 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nckap1P28660 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nckap1P28660 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nckap1P28660 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nckap1P28660 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nckap1P28660 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Nckap1P28660 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.94□□□□□ -0.5
Nckap1P28660 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nckap1P28660 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nckap1P28660 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Nckap1P28660 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nckap1P28660 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nckap1P28660 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nckap1P28660 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nckap1P28660 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Nckap1P28660 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nckap1P28660 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nckap1P28660 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Nckap1P28660 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nckap1P28660 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nckap1P28660 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nckap1P28660 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nckap1P28660 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nckap1P28660 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nckap1P28660 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nckap1P28660 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.93□□□□□ -0.5
Nckap1P28660 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Nckap1P28660 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nckap1P28660 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nckap1P28660 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nckap1P28660 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nckap1P28660 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.93□□□□□ -0.5
Nckap1P28660 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.93□□□□□ -0.5
Nckap1P28660 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.93□□□□□ -0.5
Nckap1P28660 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nckap1P28660 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nckap1P28660 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Nckap1P28660 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nckap1P28660 Gm43916-201ENSMUST00000205062 967 ntBASIC11.93□□□□□ -0.5
Nckap1P28660 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.93□□□□□ -0.5
Nckap1P28660 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.93□□□□□ -0.5
Nckap1P28660 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nckap1P28660 Gm10179-201ENSMUST00000086233 688 ntBASIC11.93□□□□□ -0.5
Nckap1P28660 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nckap1P28660 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nckap1P28660 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Nckap1P28660 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nckap1P28660 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nckap1P28660 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nckap1P28660 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nckap1P28660 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nckap1P28660 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nckap1P28660 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.93□□□□□ -0.5
Nckap1P28660 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nckap1P28660 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nckap1P28660 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.93□□□□□ -0.5
Nckap1P28660 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nckap1P28660 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nckap1P28660 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Nckap1P28660 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nckap1P28660 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nckap1P28660 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Nckap1P28660 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nckap1P28660 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nckap1P28660 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nckap1P28660 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nckap1P28660 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.93□□□□□ -0.5
Nckap1P28660 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nckap1P28660 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nckap1P28660 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nckap1P28660 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms