Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col2a1P28481 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col2a1P28481 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Col2a1P28481 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col2a1P28481 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col2a1P28481 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC13.42□□□□□ -0.26
Col2a1P28481 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col2a1P28481 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col2a1P28481 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col2a1P28481 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col2a1P28481 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col2a1P28481 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC13.42□□□□□ -0.26
Col2a1P28481 Gm4993-201ENSMUST00000118719 1174 ntBASIC13.42□□□□□ -0.26
Col2a1P28481 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC13.42□□□□□ -0.26
Col2a1P28481 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col2a1P28481 Gm3619-201ENSMUST00000219947 775 ntBASIC13.42□□□□□ -0.26
Col2a1P28481 AC166341.2-201ENSMUST00000220571 120 ntBASIC13.42□□□□□ -0.26
Col2a1P28481 Gm6722-201ENSMUST00000221586 390 ntBASIC13.42□□□□□ -0.26
Col2a1P28481 CT009527.1-201ENSMUST00000224205 339 ntBASIC13.42□□□□□ -0.26
Col2a1P28481 Lgi3-203ENSMUST00000226548 1001 ntBASIC13.42□□□□□ -0.26
Col2a1P28481 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col2a1P28481 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col2a1P28481 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col2a1P28481 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col2a1P28481 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col2a1P28481 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Col2a1P28481 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col2a1P28481 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Col2a1P28481 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Col2a1P28481 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col2a1P28481 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col2a1P28481 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col2a1P28481 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col2a1P28481 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col2a1P28481 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col2a1P28481 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col2a1P28481 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col2a1P28481 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col2a1P28481 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col2a1P28481 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Col2a1P28481 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col2a1P28481 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC13.41□□□□□ -0.26
Col2a1P28481 Gm25072-201ENSMUST00000175233 235 ntBASIC13.41□□□□□ -0.26
Col2a1P28481 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col2a1P28481 Mir6407-201ENSMUST00000184510 101 ntBASIC13.41□□□□□ -0.26
Col2a1P28481 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Col2a1P28481 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC13.41□□□□□ -0.26
Col2a1P28481 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC13.41□□□□□ -0.26
Col2a1P28481 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col2a1P28481 Prrxl1-205ENSMUST00000228878 723 ntBASIC13.41□□□□□ -0.26
Col2a1P28481 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Col2a1P28481 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Col2a1P28481 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Col2a1P28481 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col2a1P28481 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Col2a1P28481 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Col2a1P28481 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Col2a1P28481 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col2a1P28481 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Col2a1P28481 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col2a1P28481 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Col2a1P28481 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Col2a1P28481 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col2a1P28481 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col2a1P28481 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col2a1P28481 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col2a1P28481 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.4□□□□□ -0.26
Col2a1P28481 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC13.4□□□□□ -0.26
Col2a1P28481 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col2a1P28481 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col2a1P28481 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col2a1P28481 Gm25148-201ENSMUST00000104611 123 ntBASIC13.4□□□□□ -0.26
Col2a1P28481 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Col2a1P28481 Gm13668-201ENSMUST00000119237 1001 ntBASIC13.4□□□□□ -0.26
Col2a1P28481 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC13.4□□□□□ -0.26
Col2a1P28481 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC13.4□□□□□ -0.26
Col2a1P28481 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC13.4□□□□□ -0.26
Col2a1P28481 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col2a1P28481 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col2a1P28481 Gm23694-201ENSMUST00000179335 110 ntBASIC13.4□□□□□ -0.26
Col2a1P28481 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC13.4□□□□□ -0.26
Col2a1P28481 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC13.4□□□□□ -0.26
Col2a1P28481 Gm8436-201ENSMUST00000210152 1080 ntBASIC13.4□□□□□ -0.26
Col2a1P28481 Gm5749-201ENSMUST00000210673 1090 ntBASIC13.4□□□□□ -0.26
Col2a1P28481 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col2a1P28481 Gm6653-201ENSMUST00000218063 1288 ntBASIC13.4□□□□□ -0.26
Col2a1P28481 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col2a1P28481 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Col2a1P28481 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col2a1P28481 Gm37859-201ENSMUST00000195529 2173 ntBASIC13.4□□□□□ -0.26
Col2a1P28481 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col2a1P28481 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col2a1P28481 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.4□□□□□ -0.26
Col2a1P28481 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Col2a1P28481 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Col2a1P28481 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Col2a1P28481 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
Col2a1P28481 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Col2a1P28481 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col2a1P28481 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms