Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Col8a2P25318 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC9.98□□□□□ -0.81
Col8a2P25318 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col8a2P25318 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC9.98□□□□□ -0.81
Col8a2P25318 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col8a2P25318 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col8a2P25318 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Col8a2P25318 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col8a2P25318 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col8a2P25318 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col8a2P25318 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col8a2P25318 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col8a2P25318 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Col8a2P25318 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Col8a2P25318 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC9.98□□□□□ -0.81
Col8a2P25318 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col8a2P25318 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC9.98□□□□□ -0.81
Col8a2P25318 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col8a2P25318 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col8a2P25318 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col8a2P25318 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col8a2P25318 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col8a2P25318 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col8a2P25318 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Col8a2P25318 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col8a2P25318 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC9.98□□□□□ -0.81
Col8a2P25318 Gm12165-201ENSMUST00000117047 342 ntBASIC9.98□□□□□ -0.81
Col8a2P25318 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC9.98□□□□□ -0.81
Col8a2P25318 Gm13611-201ENSMUST00000118269 318 ntBASIC9.98□□□□□ -0.81
Col8a2P25318 Gm12196-201ENSMUST00000120954 262 ntBASIC9.98□□□□□ -0.81
Col8a2P25318 Gm8199-201ENSMUST00000121323 823 ntBASIC9.98□□□□□ -0.81
Col8a2P25318 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC9.98□□□□□ -0.81
Col8a2P25318 Gm10051-201ENSMUST00000145209 414 ntBASIC9.98□□□□□ -0.81
Col8a2P25318 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC9.98□□□□□ -0.81
Col8a2P25318 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC9.98□□□□□ -0.81
Col8a2P25318 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Col8a2P25318 Gm45484-201ENSMUST00000210310 1141 ntBASIC9.98□□□□□ -0.81
Col8a2P25318 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC9.98□□□□□ -0.81
Col8a2P25318 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC9.98□□□□□ -0.81
Col8a2P25318 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col8a2P25318 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col8a2P25318 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col8a2P25318 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Col8a2P25318 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col8a2P25318 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col8a2P25318 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Col8a2P25318 Gm42943-201ENSMUST00000199676 3242 ntBASIC9.98□□□□□ -0.81
Col8a2P25318 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Col8a2P25318 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Col8a2P25318 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col8a2P25318 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col8a2P25318 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col8a2P25318 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col8a2P25318 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col8a2P25318 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Col8a2P25318 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col8a2P25318 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col8a2P25318 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col8a2P25318 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col8a2P25318 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col8a2P25318 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col8a2P25318 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col8a2P25318 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Col8a2P25318 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Col8a2P25318 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Col8a2P25318 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC9.97□□□□□ -0.81
Col8a2P25318 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Col8a2P25318 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Col8a2P25318 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC9.97□□□□□ -0.81
Col8a2P25318 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Col8a2P25318 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Col8a2P25318 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Col8a2P25318 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Col8a2P25318 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Col8a2P25318 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Col8a2P25318 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Col8a2P25318 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Col8a2P25318 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Col8a2P25318 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Col8a2P25318 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Col8a2P25318 Gm7851-201ENSMUST00000117574 323 ntBASIC9.97□□□□□ -0.81
Col8a2P25318 Gm12857-201ENSMUST00000117678 592 ntBASIC9.97□□□□□ -0.81
Col8a2P25318 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC9.97□□□□□ -0.81
Col8a2P25318 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC9.97□□□□□ -0.81
Col8a2P25318 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Col8a2P25318 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC9.97□□□□□ -0.81
Col8a2P25318 Cd63-ps-202ENSMUST00000154992 717 ntBASIC9.97□□□□□ -0.81
Col8a2P25318 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Col8a2P25318 H2-Q3-201ENSMUST00000172583 608 ntBASIC9.97□□□□□ -0.81
Col8a2P25318 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Col8a2P25318 Gm4310-201ENSMUST00000177847 889 ntBASIC9.97□□□□□ -0.81
Col8a2P25318 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Col8a2P25318 Mir7677-201ENSMUST00000184226 67 ntBASIC9.97□□□□□ -0.81
Col8a2P25318 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Col8a2P25318 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC9.97□□□□□ -0.81
Col8a2P25318 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC9.97□□□□□ -0.81
Col8a2P25318 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Col8a2P25318 Gm21811-201ENSMUST00000096485 930 ntBASIC9.97□□□□□ -0.81
Col8a2P25318 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Col8a2P25318 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms