Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxd8P23463 Gm26047-202ENSMUST00000198840 115 ntBASIC12.39□□□□□ -0.43
Hoxd8P23463 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC12.39□□□□□ -0.43
Hoxd8P23463 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC12.39□□□□□ -0.43
Hoxd8P23463 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.39□□□□□ -0.43
Hoxd8P23463 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC12.39□□□□□ -0.43
Hoxd8P23463 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Hoxd8P23463 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.39□□□□□ -0.43
Hoxd8P23463 Gm13615-201ENSMUST00000120242 1612 ntBASIC12.39□□□□□ -0.43
Hoxd8P23463 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxd8P23463 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxd8P23463 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxd8P23463 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxd8P23463 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxd8P23463 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxd8P23463 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxd8P23463 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Hoxd8P23463 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxd8P23463 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxd8P23463 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxd8P23463 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Hoxd8P23463 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxd8P23463 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.39□□□□□ -0.43
Hoxd8P23463 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxd8P23463 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxd8P23463 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxd8P23463 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxd8P23463 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxd8P23463 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Hoxd8P23463 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxd8P23463 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.38□□□□□ -0.43
Hoxd8P23463 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxd8P23463 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Hoxd8P23463 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxd8P23463 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxd8P23463 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxd8P23463 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxd8P23463 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxd8P23463 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Hoxd8P23463 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxd8P23463 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxd8P23463 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.38□□□□□ -0.43
Hoxd8P23463 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxd8P23463 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxd8P23463 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC12.38□□□□□ -0.43
Hoxd8P23463 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxd8P23463 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Hoxd8P23463 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.38□□□□□ -0.43
Hoxd8P23463 Gm28388-201ENSMUST00000186262 437 ntBASIC12.38□□□□□ -0.43
Hoxd8P23463 Gm38170-201ENSMUST00000195404 816 ntBASIC12.38□□□□□ -0.43
Hoxd8P23463 Gm40332-201ENSMUST00000199847 938 ntBASIC12.38□□□□□ -0.43
Hoxd8P23463 Gm8342-201ENSMUST00000209839 757 ntBASIC12.38□□□□□ -0.43
Hoxd8P23463 AC129323.1-201ENSMUST00000216733 470 ntBASIC12.38□□□□□ -0.43
Hoxd8P23463 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Hoxd8P23463 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.38□□□□□ -0.43
Hoxd8P23463 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxd8P23463 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxd8P23463 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.38□□□□□ -0.43
Hoxd8P23463 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxd8P23463 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxd8P23463 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxd8P23463 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxd8P23463 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC12.38□□□□□ -0.43
Hoxd8P23463 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxd8P23463 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxd8P23463 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Hoxd8P23463 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.38□□□□□ -0.43
Hoxd8P23463 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxd8P23463 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxd8P23463 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Hoxd8P23463 Gm45657-201ENSMUST00000211318 1349 ntBASIC12.37□□□□□ -0.43
Hoxd8P23463 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxd8P23463 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Hoxd8P23463 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxd8P23463 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxd8P23463 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxd8P23463 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxd8P23463 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxd8P23463 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Hoxd8P23463 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.37□□□□□ -0.43
Hoxd8P23463 Gm23272-201ENSMUST00000104053 129 ntBASIC12.37□□□□□ -0.43
Hoxd8P23463 Elobl-203ENSMUST00000121228 704 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Hoxd8P23463 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxd8P23463 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxd8P23463 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.37□□□□□ -0.43
Hoxd8P23463 Gm18595-201ENSMUST00000175736 1068 ntBASIC12.37□□□□□ -0.43
Hoxd8P23463 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.37□□□□□ -0.43
Hoxd8P23463 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC12.37□□□□□ -0.43
Hoxd8P23463 Gm37629-201ENSMUST00000193635 1050 ntBASIC12.37□□□□□ -0.43
Hoxd8P23463 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.37□□□□□ -0.43
Hoxd8P23463 Gm42518-201ENSMUST00000196277 938 ntBASIC12.37□□□□□ -0.43
Hoxd8P23463 Gm45610-201ENSMUST00000209227 784 ntBASIC12.37□□□□□ -0.43
Hoxd8P23463 AC172027.1-201ENSMUST00000217659 337 ntBASIC12.37□□□□□ -0.43
Hoxd8P23463 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.37□□□□□ -0.43
Hoxd8P23463 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxd8P23463 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxd8P23463 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Hoxd8P23463 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.37□□□□□ -0.43
Hoxd8P23463 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxd8P23463 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms