Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Sdc1P18828 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Sdc1P18828 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Sdc1P18828 Gm43447-201ENSMUST00000198471 1535 ntBASIC9.77□□□□□ -0.85
Sdc1P18828 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC9.77□□□□□ -0.85
Sdc1P18828 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sdc1P18828 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC9.76□□□□□ -0.85
Sdc1P18828 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sdc1P18828 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC9.76□□□□□ -0.85
Sdc1P18828 Gm19040-201ENSMUST00000203280 4726 ntBASIC9.76□□□□□ -0.85
Sdc1P18828 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sdc1P18828 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sdc1P18828 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC9.76□□□□□ -0.85
Sdc1P18828 Gm29358-202ENSMUST00000187941 3227 ntBASIC9.76□□□□□ -0.85
Sdc1P18828 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sdc1P18828 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sdc1P18828 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sdc1P18828 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Sdc1P18828 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC9.76□□□□□ -0.85
Sdc1P18828 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Sdc1P18828 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Sdc1P18828 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sdc1P18828 Gm25911-201ENSMUST00000157621 56 ntBASIC9.76□□□□□ -0.85
Sdc1P18828 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Sdc1P18828 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
Sdc1P18828 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Sdc1P18828 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC9.76□□□□□ -0.85
Sdc1P18828 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC9.76□□□□□ -0.85
Sdc1P18828 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Sdc1P18828 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sdc1P18828 Cdk7-205ENSMUST00000225990 1159 ntBASIC9.76□□□□□ -0.85
Sdc1P18828 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sdc1P18828 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sdc1P18828 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sdc1P18828 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sdc1P18828 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Sdc1P18828 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Sdc1P18828 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sdc1P18828 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Sdc1P18828 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sdc1P18828 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.85
Sdc1P18828 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Sdc1P18828 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Sdc1P18828 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sdc1P18828 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC9.76□□□□□ -0.85
Sdc1P18828 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Sdc1P18828 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sdc1P18828 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sdc1P18828 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Sdc1P18828 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Sdc1P18828 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
Sdc1P18828 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Sdc1P18828 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC9.76□□□□□ -0.85
Sdc1P18828 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sdc1P18828 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Sdc1P18828 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Sdc1P18828 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Sdc1P18828 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Sdc1P18828 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sdc1P18828 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sdc1P18828 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sdc1P18828 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sdc1P18828 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC9.75□□□□□ -0.85
Sdc1P18828 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
Sdc1P18828 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Sdc1P18828 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Sdc1P18828 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Sdc1P18828 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sdc1P18828 Gm44369-201ENSMUST00000204543 2175 ntBASIC9.75□□□□□ -0.85
Sdc1P18828 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sdc1P18828 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sdc1P18828 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Sdc1P18828 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sdc1P18828 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sdc1P18828 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Sdc1P18828 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sdc1P18828 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sdc1P18828 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sdc1P18828 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sdc1P18828 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Sdc1P18828 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Sdc1P18828 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC9.75□□□□□ -0.85
Sdc1P18828 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
Sdc1P18828 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sdc1P18828 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC9.75□□□□□ -0.85
Sdc1P18828 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Sdc1P18828 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Sdc1P18828 Gm9083-201ENSMUST00000120423 819 ntBASIC9.75□□□□□ -0.85
Sdc1P18828 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC9.75□□□□□ -0.85
Sdc1P18828 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
Sdc1P18828 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC9.75□□□□□ -0.85
Sdc1P18828 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC9.75□□□□□ -0.85
Sdc1P18828 Gm23119-201ENSMUST00000158610 140 ntBASIC9.75□□□□□ -0.85
Sdc1P18828 Gm21854-201ENSMUST00000179901 471 ntBASIC9.75□□□□□ -0.85
Sdc1P18828 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC9.75□□□□□ -0.85
Sdc1P18828 Gm44397-201ENSMUST00000195950 113 ntBASIC9.75□□□□□ -0.85
Sdc1P18828 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC9.75□□□□□ -0.85
Sdc1P18828 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC9.75□□□□□ -0.85
Sdc1P18828 Gm10459-201ENSMUST00000202708 1155 ntBASIC9.75□□□□□ -0.85
Sdc1P18828 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC9.75□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms