Protein–RNA interactions for Protein: P13438

Tpbpa, Trophoblast-specific protein alpha, mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpaP13438 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.67
TpbpaP13438 Arhgef3-204ENSMUST00000225949 3198 ntBASIC10.83□□□□□ -0.68
TpbpaP13438 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.83□□□□□ -0.68
TpbpaP13438 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpaP13438 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
TpbpaP13438 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpaP13438 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpaP13438 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpaP13438 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
TpbpaP13438 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.83□□□□□ -0.68
TpbpaP13438 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpaP13438 AC160410.1-201ENSMUST00000219298 1972 ntBASIC10.83□□□□□ -0.68
TpbpaP13438 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpaP13438 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpaP13438 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
TpbpaP13438 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpaP13438 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
TpbpaP13438 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
TpbpaP13438 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpaP13438 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpaP13438 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpaP13438 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpaP13438 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpaP13438 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
TpbpaP13438 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpaP13438 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC10.83□□□□□ -0.68
TpbpaP13438 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC10.83□□□□□ -0.68
TpbpaP13438 Gm16177-201ENSMUST00000120728 718 ntBASIC10.83□□□□□ -0.68
TpbpaP13438 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC10.83□□□□□ -0.68
TpbpaP13438 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpaP13438 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC10.83□□□□□ -0.68
TpbpaP13438 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpaP13438 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpaP13438 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpaP13438 Gm5637-201ENSMUST00000153890 1119 ntBASIC10.83□□□□□ -0.68
TpbpaP13438 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
TpbpaP13438 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpaP13438 Tyms-ps-201ENSMUST00000219550 915 ntBASIC10.83□□□□□ -0.68
TpbpaP13438 AC125209.1-201ENSMUST00000225812 766 ntBASIC10.83□□□□□ -0.68
TpbpaP13438 AC154532.1-201ENSMUST00000227860 965 ntBASIC10.83□□□□□ -0.68
TpbpaP13438 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpaP13438 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpaP13438 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpaP13438 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpaP13438 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpaP13438 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
TpbpaP13438 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC10.83□□□□□ -0.68
TpbpaP13438 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpaP13438 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
TpbpaP13438 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpaP13438 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpaP13438 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpaP13438 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpaP13438 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpaP13438 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.83□□□□□ -0.68
TpbpaP13438 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
TpbpaP13438 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpaP13438 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpaP13438 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpaP13438 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpaP13438 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TpbpaP13438 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
TpbpaP13438 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
TpbpaP13438 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TpbpaP13438 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.82□□□□□ -0.68
TpbpaP13438 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
TpbpaP13438 Gm42706-201ENSMUST00000199733 1910 ntBASIC10.82□□□□□ -0.68
TpbpaP13438 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
TpbpaP13438 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TpbpaP13438 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TpbpaP13438 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
TpbpaP13438 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
TpbpaP13438 Gm12846-201ENSMUST00000120431 1373 ntBASIC10.82□□□□□ -0.68
TpbpaP13438 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC10.82□□□□□ -0.68
TpbpaP13438 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TpbpaP13438 Gm12314-201ENSMUST00000118104 538 ntBASIC10.82□□□□□ -0.68
TpbpaP13438 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC10.82□□□□□ -0.68
TpbpaP13438 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TpbpaP13438 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TpbpaP13438 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TpbpaP13438 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TpbpaP13438 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC10.82□□□□□ -0.68
TpbpaP13438 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.82□□□□□ -0.68
TpbpaP13438 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC10.82□□□□□ -0.68
TpbpaP13438 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC10.82□□□□□ -0.68
TpbpaP13438 Gm7653-201ENSMUST00000214567 508 ntBASIC10.82□□□□□ -0.68
TpbpaP13438 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC10.82□□□□□ -0.68
TpbpaP13438 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
TpbpaP13438 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TpbpaP13438 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TpbpaP13438 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TpbpaP13438 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TpbpaP13438 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TpbpaP13438 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
TpbpaP13438 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
TpbpaP13438 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TpbpaP13438 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
TpbpaP13438 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
TpbpaP13438 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TpbpaP13438 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms