Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Col1a1P11087 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col1a1P11087 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col1a1P11087 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Col1a1P11087 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col1a1P11087 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC13.87□□□□□ -0.19
Col1a1P11087 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col1a1P11087 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Col1a1P11087 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Col1a1P11087 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col1a1P11087 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Col1a1P11087 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC13.87□□□□□ -0.19
Col1a1P11087 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col1a1P11087 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Col1a1P11087 Gm4895-201ENSMUST00000181646 1137 ntBASIC13.87□□□□□ -0.19
Col1a1P11087 Gm37638-201ENSMUST00000194337 1123 ntBASIC13.87□□□□□ -0.19
Col1a1P11087 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC13.87□□□□□ -0.19
Col1a1P11087 Gm6423-201ENSMUST00000204315 934 ntBASIC13.87□□□□□ -0.19
Col1a1P11087 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col1a1P11087 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col1a1P11087 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC13.87□□□□□ -0.19
Col1a1P11087 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col1a1P11087 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Col1a1P11087 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col1a1P11087 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col1a1P11087 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col1a1P11087 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col1a1P11087 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Col1a1P11087 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC13.86□□□□□ -0.19
Col1a1P11087 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Col1a1P11087 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col1a1P11087 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col1a1P11087 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col1a1P11087 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col1a1P11087 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Col1a1P11087 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col1a1P11087 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Col1a1P11087 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col1a1P11087 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col1a1P11087 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col1a1P11087 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col1a1P11087 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col1a1P11087 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col1a1P11087 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col1a1P11087 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.86□□□□□ -0.19
Col1a1P11087 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Col1a1P11087 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col1a1P11087 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col1a1P11087 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.86□□□□□ -0.19
Col1a1P11087 Gm11578-201ENSMUST00000118530 459 ntBASIC13.86□□□□□ -0.19
Col1a1P11087 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC13.86□□□□□ -0.19
Col1a1P11087 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC13.86□□□□□ -0.19
Col1a1P11087 Gm24809-201ENSMUST00000175318 271 ntBASIC13.86□□□□□ -0.19
Col1a1P11087 Gm9507-202ENSMUST00000180157 654 ntBASIC13.86□□□□□ -0.19
Col1a1P11087 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col1a1P11087 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col1a1P11087 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Col1a1P11087 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col1a1P11087 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col1a1P11087 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col1a1P11087 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Col1a1P11087 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col1a1P11087 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col1a1P11087 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Col1a1P11087 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col1a1P11087 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col1a1P11087 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col1a1P11087 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Col1a1P11087 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col1a1P11087 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col1a1P11087 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col1a1P11087 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col1a1P11087 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col1a1P11087 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col1a1P11087 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
Col1a1P11087 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col1a1P11087 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col1a1P11087 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col1a1P11087 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.85□□□□□ -0.19
Col1a1P11087 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col1a1P11087 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col1a1P11087 Gm13445-201ENSMUST00000121664 307 ntBASIC13.85□□□□□ -0.19
Col1a1P11087 Gm14441-201ENSMUST00000121960 540 ntBASIC13.85□□□□□ -0.19
Col1a1P11087 Gm25492-201ENSMUST00000157383 129 ntBASIC13.85□□□□□ -0.19
Col1a1P11087 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col1a1P11087 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC13.85□□□□□ -0.19
Col1a1P11087 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC13.85□□□□□ -0.19
Col1a1P11087 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Col1a1P11087 Gm42779-201ENSMUST00000198807 406 ntBASIC13.85□□□□□ -0.19
Col1a1P11087 Gm6855-201ENSMUST00000206307 790 ntBASIC13.85□□□□□ -0.19
Col1a1P11087 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC13.85□□□□□ -0.19
Col1a1P11087 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Col1a1P11087 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col1a1P11087 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col1a1P11087 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Col1a1P11087 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col1a1P11087 Gm18798-201ENSMUST00000187264 1700 ntBASIC13.85□□□□□ -0.19
Col1a1P11087 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col1a1P11087 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC13.84□□□□□ -0.19
Col1a1P11087 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms