Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC15.42■□□□□ 0.06
Hoxc9P09633 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC15.42■□□□□ 0.06
Hoxc9P09633 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Hoxc9P09633 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC15.42■□□□□ 0.06
Hoxc9P09633 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Hoxc9P09633 Gm37826-201ENSMUST00000195329 322 ntBASIC15.42■□□□□ 0.06
Hoxc9P09633 CT573047.1-201ENSMUST00000223652 851 ntBASIC15.42■□□□□ 0.06
Hoxc9P09633 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hoxc9P09633 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Hoxc9P09633 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Hoxc9P09633 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hoxc9P09633 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hoxc9P09633 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hoxc9P09633 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hoxc9P09633 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hoxc9P09633 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Hoxc9P09633 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Hoxc9P09633 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Hoxc9P09633 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hoxc9P09633 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hoxc9P09633 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hoxc9P09633 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Hoxc9P09633 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC15.41■□□□□ 0.06
Hoxc9P09633 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Hoxc9P09633 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Hoxc9P09633 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
Hoxc9P09633 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hoxc9P09633 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC15.41■□□□□ 0.06
Hoxc9P09633 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hoxc9P09633 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hoxc9P09633 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Hoxc9P09633 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC15.41■□□□□ 0.06
Hoxc9P09633 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC15.41■□□□□ 0.06
Hoxc9P09633 AC124457.1-201ENSMUST00000198845 120 ntBASIC15.41■□□□□ 0.06
Hoxc9P09633 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC15.41■□□□□ 0.06
Hoxc9P09633 Gm3017-201ENSMUST00000203603 1126 ntBASIC15.41■□□□□ 0.06
Hoxc9P09633 Gm45120-201ENSMUST00000208880 408 ntBASIC15.41■□□□□ 0.06
Hoxc9P09633 Gm45484-201ENSMUST00000210310 1141 ntBASIC15.41■□□□□ 0.06
Hoxc9P09633 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC15.41■□□□□ 0.06
Hoxc9P09633 AC165154.1-201ENSMUST00000226661 340 ntBASIC15.41■□□□□ 0.06
Hoxc9P09633 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hoxc9P09633 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hoxc9P09633 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hoxc9P09633 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hoxc9P09633 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Hoxc9P09633 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC15.41■□□□□ 0.06
Hoxc9P09633 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hoxc9P09633 Gm5053-201ENSMUST00000208361 1678 ntBASIC15.41■□□□□ 0.06
Hoxc9P09633 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hoxc9P09633 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Hoxc9P09633 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hoxc9P09633 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hoxc9P09633 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hoxc9P09633 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Hoxc9P09633 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC15.4■□□□□ 0.06
Hoxc9P09633 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hoxc9P09633 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hoxc9P09633 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hoxc9P09633 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hoxc9P09633 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hoxc9P09633 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Hoxc9P09633 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Hoxc9P09633 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hoxc9P09633 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hoxc9P09633 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hoxc9P09633 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hoxc9P09633 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hoxc9P09633 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hoxc9P09633 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Hoxc9P09633 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC15.4■□□□□ 0.06
Hoxc9P09633 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC15.4■□□□□ 0.06
Hoxc9P09633 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hoxc9P09633 Gm26047-201ENSMUST00000157308 113 ntBASIC15.4■□□□□ 0.06
Hoxc9P09633 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC15.4■□□□□ 0.06
Hoxc9P09633 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC15.4■□□□□ 0.06
Hoxc9P09633 Gm26134-201ENSMUST00000178484 110 ntBASIC15.4■□□□□ 0.06
Hoxc9P09633 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Hoxc9P09633 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC15.4■□□□□ 0.06
Hoxc9P09633 Gm26047-202ENSMUST00000198840 115 ntBASIC15.4■□□□□ 0.06
Hoxc9P09633 AC114645.1-201ENSMUST00000215831 187 ntBASIC15.4■□□□□ 0.06
Hoxc9P09633 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hoxc9P09633 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hoxc9P09633 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hoxc9P09633 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hoxc9P09633 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC15.4■□□□□ 0.06
Hoxc9P09633 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
Hoxc9P09633 Gm18642-201ENSMUST00000206642 1400 ntBASIC15.4■□□□□ 0.06
Hoxc9P09633 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hoxc9P09633 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hoxc9P09633 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hoxc9P09633 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hoxc9P09633 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hoxc9P09633 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hoxc9P09633 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hoxc9P09633 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hoxc9P09633 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Hoxc9P09633 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.06
Hoxc9P09633 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hoxc9P09633 Gm7114-201ENSMUST00000190159 1789 ntBASIC15.39■□□□□ 0.05
Hoxc9P09633 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms